Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00353 and BSU01830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:23
# Commandline: needle
# -asequence dna-align/BSNT_00353___ndhF.1.22522.seq
# -bsequence dna-align/BSU01830___ndhF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00353___ndhF-BSU01830___ndhF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00353___ndhF-BSU01830___ndhF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00353___ndhF
# 2: BSU01830___ndhF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1518
# Identity: 1477/1518 (97.3%)
# Similarity: 1477/1518 (97.3%)
# Gaps: 0/1518 ( 0.0%)
# Score: 7221.0
#
#
#=======================================
BSNT_00353___ 1 ATGTTAGTTTCGCTGAGTTTGTCATCATTATTAACATTATTTTTTATTAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 1 ATGTTAGTTTCGCTGAGTTTGTCATCATTATTAACATTATTTTTTATTAT 50
BSNT_00353___ 51 GCTTATGGCTTCTGGGATTAGTGGACTATTGTTTTTACATCCGCGAGTAC 100
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU01830___nd 51 GCTTATGGCTTCTGGGATTAGTGGACTATTGTTTTTACATCCGCGTGTAC 100
BSNT_00353___ 101 CCTTGAGTTTTGTTCGCATTCATATTGGGATCTTGGCTTTACCACTTTTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 101 CCTTGAGTTTTGTTCGCATTCATATTGGGATCTTGGCTTTACCACTTTTG 150
BSNT_00353___ 151 GTTTCCTTACTGATTCTTGCCAATAGTGGTGTGAGTGGAAATGTTGGCCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 151 GTTTCCTTACTGATTCTTGCCAATAGTGGTGTGAGTGGAAATGTTGGCCC 200
BSNT_00353___ 201 TTGGCACTTAGATTCCTTAGCTTGTTTAATGACTTTCTTTGTTCTTGCAA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 201 TTGGCACTTAGATTCCTTAGCTTGTTTAATGACTTTCTTTGTTCTTGCAA 250
BSNT_00353___ 251 TTGGATTCATCATTCAGCGTTTTTCTGTACGTTACTTAATGGGGGATCGA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 251 TTGGATTCATCATTCAGCGTTTTTCTGTACGTTACTTAATGGGGGATCGA 300
BSNT_00353___ 301 TCTTATCGAAAATATTTTACGCTTTTTACTTTCACAACAGGAGCTGCTTC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 301 TCTTATCGAAAATATTTTACGCTTTTTACTTTCACAACAGGAGCTGCTTC 350
BSNT_00353___ 351 AATGACATGGTTAAGTGGTGATCTCCGCTTGATGGTTCTATTTTGGGGAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 351 AATGACATGGTTAAGTGGTGATCTCCGCTTGATGGTTCTATTTTGGGGAG 400
BSNT_00353___ 401 CGACTCTTGTTGGATTAACCTTACTTATTAGGTTAAACAGTGCTTGGCAA 450
|.|||||||||||.||||||||||||||.|||||||||||||||||||||
BSU01830___nd 401 CAACTCTTGTTGGTTTAACCTTACTTATAAGGTTAAACAGTGCTTGGCAA 450
BSNT_00353___ 451 GTGGCTAGTGAAGCAGCCAAAATTTCTGGACGGTTATTTTTGTTAAGTTG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 451 GTGGCTAGTGAAGCAGCCAAAATTTCTGGACGGTTATTTTTGTTAAGTTG 500
BSNT_00353___ 501 GTTTTCTTTGTTTTTTGCGATGACGTGGCTTTTTCATGCCACAGGTCAAT 550
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU01830___nd 501 GTTTTCTTTGTTTTTTGCGATGATGTGGCTTTTTCATGCCACAGGTCAAT 550
BSNT_00353___ 551 GGCAGTTATCATTGGTTGTAACAAATGAAAGTTTAGCTGGGCTGGGAGAA 600
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 551 GGCAGCTATCATTGGTTGTAACAAATGAAAGTTTAGCTGGGCTGGGAGAA 600
BSNT_00353___ 601 TGGGGGAGAACAGGGATTCAGCTATTGATTGTATTAGCAGTGATTATTCC 650
||||.||||||||||||||||||||||||||||.|.||.|||||.|||||
BSU01830___nd 601 TGGGAGAGAACAGGGATTCAGCTATTGATTGTACTGGCGGTGATCATTCC 650
BSNT_00353___ 651 TGCAGCTCAATGGCCGTTCCAAAGATGGTTGGTTGAGTCTATTGTTGCTC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 651 TGCAGCTCAATGGCCGTTCCAAAGATGGTTGGTTGAGTCTATTGTTGCTC 700
BSNT_00353___ 701 CAACCCCTGTTTCTGCAATTATGCATGCAGGTTTAGTAAATGCGGGAGGA 750
|.|||||.|||||||||||||||||||||||||||||||||||.||||||
BSU01830___nd 701 CCACCCCAGTTTCTGCAATTATGCATGCAGGTTTAGTAAATGCTGGAGGA 750
BSNT_00353___ 751 ATAATACTAACTCGATTTTCACCTCTATTTCATGGTGGTATCGCTTCGAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 751 ATAATACTAACTCGATTTTCACCTCTATTTCATGGTGGTATCGCTTCGAT 800
BSNT_00353___ 801 TATCTTACTTCTGCTTGCTAGCATTTCTGTATTGATTGGAACTGGAATTA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 801 TATCTTACTTCTGCTTGCTAGCATTTCTGTATTGATTGGAACTGGAATTA 850
BSNT_00353___ 851 GTTTAGTCCAGGTTGATTATAAACGTCAGTTAGTAGGCTCCACGATTGGA 900
|||||||.|||||||||||||||||.||||||||||||||||||||||||
BSU01830___nd 851 GTTTAGTTCAGGTTGATTATAAACGCCAGTTAGTAGGCTCCACGATTGGA 900
BSNT_00353___ 901 CAAATGGGGTTTATGCTCATTCAGTGTGCATTAGGCGCCTATATAGCAGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 901 CAAATGGGGTTTATGCTCATTCAGTGTGCATTAGGCGCCTATATAGCAGC 950
BSNT_00353___ 951 CATTATTCATCTTATTTTACATGGTTTATTCAAAGCTACGTTGTTTCTAC 1000
|||||||||.|||||||||||||||||||||||.||||||||||||||||
BSU01830___nd 951 CATTATTCACCTTATTTTACATGGTTTATTCAAGGCTACGTTGTTTCTAC 1000
BSNT_00353___ 1001 AAGCTGGTTCAGCAGTAGGGCGTCATGAAGTATTGGCTCGCACTAATGAA 1050
|.|||||||||||||||||||||||||||||||.|.||||||||||||||
BSU01830___nd 1001 AGGCTGGTTCAGCAGTAGGGCGTCATGAAGTATCGACTCGCACTAATGAA 1050
BSNT_00353___ 1051 AGAACATCCTATTTATGGGTCATGGCTGGTCGGATTTTATCCTTAGTAAT 1100
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU01830___nd 1051 AGAACATCCTATTTATGGGTCATGGCTGGTCGGATTTTATCCTTAGTTAT 1100
BSNT_00353___ 1101 AGGCGTTGCTTTTTGGCTCGCTGCTCCTGGAGAGGTATATCAATTCATTA 1150
|||.|||||||||||||||.|||||||||||||.|..|||||.||.||.|
BSU01830___nd 1101 AGGTGTTGCTTTTTGGCTCACTGCTCCTGGAGACGGGTATCACTTAATCA 1150
BSNT_00353___ 1151 GTGCGCTGATCTTAGGGTGGTCATTGTCCGTTTCTTGGAATCAGCTTGTC 1200
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU01830___nd 1151 GTGCGCTGATCTTAGGGTGGTCATTGTCCGTTTCTTGGGATCAGCTTGTC 1200
BSNT_00353___ 1201 GCTTTTGGAGAGGGTCGAATTGGCCGAATTGCCGGCTTAACTGTTTTAGG 1250
||||||||||||||.|||||||||||.||||||||.||||||||||||||
BSU01830___nd 1201 GCTTTTGGAGAGGGCCGAATTGGCCGGATTGCCGGTTTAACTGTTTTAGG 1250
BSNT_00353___ 1251 AGGAGCAGCCCTCGTATATTTTATCATTCATAACCTTTTCTATAAGTGGC 1300
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU01830___nd 1251 AGGAGCAGCCCTCGTATATTTTATCATTCATCACCTTTTCTATAAGTGGC 1300
BSNT_00353___ 1301 TGCATACAACCATTTTTCAAAGTGTTCAACCTCCAATGTCAGCTGTCATG 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 1301 TGCATACAACCATTTTTCAAAGTGTTCAACCTCCAATGTCAGCTGTCATG 1350
BSNT_00353___ 1351 ATTGTCGTATGTCTCTTATTATTTGGCAGTGCTTTAGGTACATGGGTTGC 1400
||||||||||||||||||.|.||||||||||||||||||||.||||||||
BSU01830___nd 1351 ATTGTCGTATGTCTCTTACTCTTTGGCAGTGCTTTAGGTACGTGGGTTGC 1400
BSNT_00353___ 1401 TCGTTATCGTTCTTCCGTTTTTTTCGCGGTGCTCTATCTTTGGTTAGTTC 1450
||||.|||||||||||||||||||||||||.|||||||||||||||||.|
BSU01830___nd 1401 TCGTCATCGTTCTTCCGTTTTTTTCGCGGTACTCTATCTTTGGTTAGTCC 1450
BSNT_00353___ 1451 GATTAGGTGAAGCAAAACCAAAGTCAGTAGAGAGTCACCCAGACTACCTT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU01830___nd 1451 GATTAGGTGAAGCAAAACCAAAGTCAGTAGAGAGTCACCCAGACTACCTT 1500
BSNT_00353___ 1501 AAACAATATATTTCATAA 1518
||||||||||||||||||
BSU01830___nd 1501 AAACAATATATTTCATAA 1518
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