Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00362 and BSU02030

See Amino acid alignment / Visit BSNT_00362 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:24
# Commandline: needle
#    -asequence dna-align/BSNT_00362___ybdM.1.22522.seq
#    -bsequence dna-align/BSU02030___ybdM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00362___ybdM-BSU02030___ybdM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00362___ybdM-BSU02030___ybdM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00362___ybdM
# 2: BSU02030___ybdM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity:     758/771 (98.3%)
# Similarity:   758/771 (98.3%)
# Gaps:           0/771 ( 0.0%)
# Score: 3738.0
# 
#
#=======================================

BSNT_00362___      1 ATGGCATTAAAACTTCTAAAAAAACTGCTATTTGACCGCCCTCTAAAGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb      1 ATGGCATTAAAACTTCTAAAAAAACTGCTATTTGACCGCCCTCTAAAGAA     50

BSNT_00362___     51 CGGCGTTATCTTAAATCATCAATACAAAATCGAAGAGTGCCTCGGTATGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb     51 CGGCGTTATCTTAAATCATCAATACAAAATCGAAGAGTGCCTCGGTATGG    100

BSNT_00362___    101 GAGGCTACGGTTTGGTTTATTTGTGCACCGATATCCTAACTCAAACACCT    150
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU02030___yb    101 GAGGCTACGGTTTGGTTTATTTGTGCACCGATATCCTAGCTCAAACACCT    150

BSNT_00362___    151 TATGTCTTAAAACAGCTTCGGCCGACAAAAGCGAAAAAGGAAAAAGAGAA    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU02030___yb    151 TATGTCTTAAAACAGCTTCGGCCGACAAAAGCCAAAAAGGAAAAAGAGAA    200

BSNT_00362___    201 AGTCCGATTCCAACAGGAAATAAAACTGCTCAATAGCATTCACCACCCGC    250
                     ||||||||||||.||||||||||||||||||||.|.||||||||||||||
BSU02030___yb    201 AGTCCGATTCCAGCAGGAAATAAAACTGCTCAAAAACATTCACCACCCGC    250

BSNT_00362___    251 AAATTCCGGGCTTCATAGATGAGTTCATCATAGACGGACAGGCTTATTAT    300
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU02030___yb    251 AAATTCCGGGCTTCATAGATGAATTCATCATAGACGGACAGGCTTATTAT    300

BSNT_00362___    301 GTCATGCAGTTCATTGAGGGAGAGAATATAGAAGAATTATTATTTTTTCG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    301 GTCATGCAGTTCATTGAGGGAGAGAATATAGAAGAATTATTATTTTTTCG    350

BSNT_00362___    351 AAAACAGCCGTTCACAGAGCTTATGGCATTACAACTGATTTCGCAGCTGC    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU02030___yb    351 AAAACAGCCGTTCACAGAGCTTATGGCGTTACAACTGATTTCGCAGCTGC    400

BSNT_00362___    401 TTGAGATTATAGAATACCTGCATGATCGCCTTATCTTCCACAGCGACATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    401 TTGAGATTATAGAATACCTGCATGATCGCCTTATCTTCCACAGCGACATC    450

BSNT_00362___    451 AGGACGCCTAATATCATCATCAATGACGGCAGGCTCTGCCTCCTCGATTT    500
                     ||.|||||||||||||||||||||||.|||||||||||||||.|||||||
BSU02030___yb    451 AGAACGCCTAATATCATCATCAATGATGGCAGGCTCTGCCTCATCGATTT    500

BSNT_00362___    501 CGGCCTTGCCAAACAATTGACTCCTGAAGAAATGGAGGAAATAAAGGTAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    501 CGGCCTTGCCAAACAATTGACTCCTGAAGAAATGGAGGAAATAAAGGTAC    550

BSNT_00362___    551 GAAAACAGGATGACTTCTTCGATCTCGGAGAAACGCTGTTATTCCTGCTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU02030___yb    551 GAAAACAGGATGACTTCTTCGATCTCGGAGAAACGCTGTTATTCTTGCTG    600

BSNT_00362___    601 TACTCTCAATATAAAGGAAAAAAGAAGAAAAACGGCACTTGGCTGGAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    601 TACTCTCAATATAAAGGAAAAAAGAAGAAAAACGGCACTTGGCTGGAGGA    650

BSNT_00362___    651 ATTAACACTGACAAAGGAAGTAACCCTGCTGCTGAAAAGATTATTGGGCA    700
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU02030___yb    651 ATTAACACTGACAAAGGAAGTAACCTTGCTGCTGAAAAGATTATTGGGCA    700

BSNT_00362___    701 TCGAGGAAGAGTATCAGCACACCGCTTCCATTCGCGAGGATCTAAACCGG    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU02030___yb    701 TTGAGGAAGAGTATCAGCACACCGCTTCCATTCGCGAGGATCTAAACCGG    750

BSNT_00362___    751 GCCATTCAATCGGTCACATAA    771
                     |||||||||||||||||||||
BSU02030___yb    751 GCCATTCAATCGGTCACATAA    771


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00362 and BSU02030

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
