Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00380 and BSU02160

See Amino acid alignment / Visit BSNT_00380 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:27
# Commandline: needle
#    -asequence dna-align/BSNT_00380___ybfA.1.22522.seq
#    -bsequence dna-align/BSU02160___ybfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00380___ybfA-BSU02160___ybfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00380___ybfA-BSU02160___ybfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00380___ybfA
# 2: BSU02160___ybfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     908/930 (97.6%)
# Similarity:   908/930 (97.6%)
# Gaps:          12/930 ( 1.3%)
# Score: 4500.0
# 
#
#=======================================

BSNT_00380___      1 GTGGGGATTGATTTGAAAACAAGAGAATCATCTGTCGGATTAAAATTCAG     50
                                 ||||||||||||||||||||||||||.|||||||||||
BSU02160___yb      1 ------------TTGAAAACAAGAGAATCATCTGTCGGGTTAAAATTCAG     38

BSNT_00380___     51 AAAGTTCAATCGATTTTATACAAACGTCCTTGGTTTCCTTAATGAGCACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb     39 AAAGTTCAATCGATTTTATACAAACGTCCTTGGTTTCCTTAATGAGCACA     88

BSNT_00380___    101 TTTACGACAGCCCGTTTTCCTTAACAGAAACACGGATTTTATTTGAGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb     89 TTTACGACAGCCCGTTTTCCTTAACAGAAACACGGATTTTATTTGAGATT    138

BSNT_00380___    151 TATAATACGCCTAATTGTACGGCAAAAGCTCTTCAGGATAAGCTGGGGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    139 TATAATACGCCTAATTGTACGGCAAAAGCTCTTCAGGATAAGCTGGGGCT    188

BSNT_00380___    201 TGACCGGGGATATGTCAGCAGGATTGTGAAGCAGTTTGAAATAGAAGATT    250
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU02160___yb    189 TGACCGGGGATATGTCAGCAGGATTGTGAAGCAGTTTGAAAAAGAAGATT    238

BSNT_00380___    251 TGATCTATAAACAGAGGAGCAAAGATGACGCTCGCCACCATTACATTTTT    300
                     ||||.||||||||||||||||||||||||||.||||||||||||||||||
BSU02160___yb    239 TGATTTATAAACAGAGGAGCAAAGATGACGCCCGCCACCATTACATTTTT    288

BSNT_00380___    301 GTCACAGAAACAGGAAAAACGATTTATAAAAAGCTGGAGGAGAAAGCCAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    289 GTCACAGAAACAGGAAAAACGATTTATAAAAAGCTGGAGGAGAAAGCCAA    338

BSNT_00380___    351 CGAACAAGTAGAACTGATGCTGAAGGAAATCAACCAAAAGGAGCAGCAGA    400
                     ||||||||||||||||||||||||||.|||||||||||||||||||||.|
BSU02160___yb    339 CGAACAAGTAGAACTGATGCTGAAGGTAATCAACCAAAAGGAGCAGCACA    388

BSNT_00380___    401 AGCTTTCCGAGGCGATGGCAGAGATTGAAGAGATCCTTTCACAGTCGCTT    450
                     |||||.||||||||||||||||||||||||.|||||||||||||||||||
BSU02160___yb    389 AGCTTGCCGAGGCGATGGCAGAGATTGAAGCGATCCTTTCACAGTCGCTT    438

BSNT_00380___    451 TCTGCCAGAACATCAGAGATATCGATTAGAGATTATTTTCTTTCGGAGGA    500
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    439 TCTGCCAGAGCATCAGAGATATCGATTAGAGATTATTTTCTTTCGGAGGA    488

BSNT_00380___    501 TATTCAACTCCTTATTGAGAAACAAAGACAATTTTACGCGGAGGCTCACG    550
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    489 TCTTCAACTCCTTATTGAGAAACAAAGACAATTTTACGCGGAGGCTCACG    538

BSNT_00380___    551 GTTGGGATGACACGTTTTTAGCTTATCTTCAGGAGACATTTGACGCTGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    539 GTTGGGATGACACGTTTTTAGCTTATCTTCAGGAGACATTTGACGCTGAC    588

BSNT_00380___    601 ATCGAAAAAATATGGATTGCGGAAAGCGGCGGGAAATTTGCCGGCTCTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    589 ATCGAAAAAATATGGATTGCGGAAAGCGGCGGGAAATTTGCCGGCTCTGT    638

BSNT_00380___    651 CGGGTTGGTCAAGCACGATGAAAAGACAGTCCAGCTCAGATGGTTTCTGG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    639 CGGGTTGGTCAAGCACGATGAAAAGACAGTCCAGCTCAGATGGTTTCTGG    688

BSNT_00380___    701 TTGATGCGGATTTTCGGGGCAGGGGGCTTGGCACGCAATTGCTGGAGCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    689 TTGATGCGGATTTTCGGGGCAGGGGGCTTGGCACGCAATTGCTGGAGCAT    738

BSNT_00380___    751 CTGGTTGCATACTGCCAAGACATGAAGTTTGACCGCATTTTCCTTTGGAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    739 CTGGTTGCATACTGCCAAGACATGAAGTTTGACCGCATTTTCCTTTGGAC    788

BSNT_00380___    801 GGTGAGCACGATGGCTGAGGCTCGTCCGCTCTATAAAAAATTTGGATTCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    789 GGTGAGCACGATGGCTGAGGCTCGTCCGCTCTATAAAAAATTTGGATTCA    838

BSNT_00380___    851 GGATAAGTGAAGTAAAACAAGAAGCGCCATTATGGGGACAGCAGCTGACA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02160___yb    839 GGATAAGTGAAGTAAAACAAGAAGCGCCATTATGGGGACAGCAGCTGACA    888

BSNT_00380___    901 GAAGAACGGTGGGATTTGGAGCTGTCATGA    930
                     ||||||||||||||||||||||||||||||
BSU02160___yb    889 GAAGAACGGTGGGATTTGGAGCTGTCATGA    918


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