Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00436 and BSU02460

See Amino acid alignment / Visit BSNT_00436 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:32
# Commandline: needle
#    -asequence dna-align/BSNT_00436___ycbC.1.22522.seq
#    -bsequence dna-align/BSU02460___ycbC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00436___ycbC-BSU02460___ycbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00436___ycbC-BSU02460___ycbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00436___ycbC
# 2: BSU02460___ycbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 927
# Identity:     918/927 (99.0%)
# Similarity:   918/927 (99.0%)
# Gaps:           0/927 ( 0.0%)
# Score: 4554.0
# 
#
#=======================================

BSNT_00436___      1 ATGAGCCGTATCAGAAAAGCACCCGCTGGAATTTTAGGTTTTCCGGTTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc      1 ATGAGCCGTATCAGAAAAGCACCCGCTGGAATTTTAGGTTTTCCGGTTGC     50

BSNT_00436___     51 TCCTTTTAACACACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAACA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc     51 TCCTTTTAACACACAAGGAAAACTGGAGGAAGAAGCTCTTTTTCAAAACA    100

BSNT_00436___    101 TTGAGTTTTTGCTGAATGAGGGCTTGGAAGCGATATTTATTGCTTGCGGG    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU02460___yc    101 TTGAGTTTTTGCTGAATGAGGGCTTGGAAGCGATATTTATCGCTTGCGGG    150

BSNT_00436___    151 TCTGGTGAATTCCAATCTCTCAGCCAGAAGGAATATGAGCAAATGGTGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    151 TCTGGTGAATTCCAATCTCTCAGCCAGAAGGAATATGAGCAAATGGTGGA    200

BSNT_00436___    201 AGTCGCAGTCTCGGCAGCCGGAGGAAAGGTGCCGGTTTACACGGGGGTGG    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU02460___yc    201 AGTCGCAGTCTCGGCAGCCGGAGGAAAGGTGCCGGTCTACACGGGGGTGG    250

BSNT_00436___    251 GCGGCAACCTCAGCACAGCGCTTGATTGGGCGCAGCTGTCGGAGAAAAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    251 GCGGCAACCTCAGCACAGCGCTTGATTGGGCGCAGCTGTCGGAGAAAAAA    300

BSNT_00436___    301 GGCGCCGACGGCTACTTGATCCTGCCTCCGTATTTGGTGCATGGCGAACA    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU02460___yc    301 GGCGCCGACGGCTACTTGATTCTGCCTCCGTATTTGGTGCATGGCGAACA    350

BSNT_00436___    351 GGAGGGGCTGTACCAGTATGCGAAAACGATTATTGAAAGCACTGACTTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    351 GGAGGGGCTGTACCAGTATGCGAAAACGATTATTGAAAGCACTGACTTGA    400

BSNT_00436___    401 ACGCGATTCTTTATCAGCGCGATAACGCCGTTCTCTCTGTTGAACAGATC    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU02460___yc    401 ACGCGATTCTTTATCAGCGCGATAACGCAGTTCTCTCTGTTGAACAGATC    450

BSNT_00436___    451 AAACGTCTGACCGAATGTGAACAGCTTGTCGGTGTCAAAGACGGGGTAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    451 AAACGTCTGACCGAATGTGAACAGCTTGTCGGTGTCAAAGACGGGGTAGG    500

BSNT_00436___    501 AAATATGGATTTGAATATCAACCTCGTCTATACGATCGGCGACCGCTTAG    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||.|
BSU02460___yc    501 AAATATGGATTTGAATATCAATCTCGTCTATACGATCGGCGACCGCTTGG    550

BSNT_00436___    551 GATGGCTCAACGGAATGCCGATGGCTGAAGTGACGATGCCGGCTTATCTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    551 GATGGCTCAACGGAATGCCGATGGCTGAAGTGACGATGCCGGCTTATCTG    600

BSNT_00436___    601 CCGATCGGGTTCCACTCTTACTCTTCAGCGATTTCAAATTATATCCCGCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    601 CCGATCGGGTTCCACTCTTACTCTTCAGCGATTTCAAATTATATCCCGCA    650

BSNT_00436___    651 TATTTCGCGAATGTTCTATGATGCATTGAAAAATGGAAATGACGAGCTTG    700
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU02460___yc    651 TATTTCGCGAATGTTCTATGATGCATTGAAAAACGGAAATGACGAGCTTG    700

BSNT_00436___    701 TGAAGGAACTCTATCGGCATGTGATTCTGCCGATCAACGACATTCGCAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    701 TGAAGGAACTCTATCGGCATGTGATTCTGCCGATCAACGACATTCGCAAA    750

BSNT_00436___    751 CAACGAAAAGGCTACGCCGTATCCTTAATTAAAGCCGGTATGGAAATCAT    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU02460___yc    751 CAACGAAAAGGCTACGCCGTATCCTTGATTAAAGCCGGTATGGAAATCAT    800

BSNT_00436___    801 GGGTTTGAATGTAAGGAATACAGCCAGACCGCCTGTCGGCCCGGTTGAAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02460___yc    801 GGGTTTGAATGTAAGGAATACAGCCAGACCGCCTGTCGGCCCGGTTGAAA    850

BSNT_00436___    851 AAGATCATTATCAGCAATTGGAAGCAATTTTGAAGCAGGCGGCTGATCGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU02460___yc    851 AAGATCATTATCAGCAATTGGAAGCAATTTTGAAGCAGGCGGCTGACCGT    900

BSNT_00436___    901 TTTCCGAAAAAAGCCGCGACGGTTTGA    927
                     |||||||||||||||||||||||||||
BSU02460___yc    901 TTTCCGAAAAAAGCCGCGACGGTTTGA    927


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