Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00486 and BSU02740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:37
# Commandline: needle
# -asequence dna-align/BSNT_00486___yccH.1.22522.seq
# -bsequence dna-align/BSU02740___natR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00486___yccH-BSU02740___natR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00486___yccH-BSU02740___natR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00486___yccH
# 2: BSU02740___natR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 702
# Identity: 696/702 (99.1%)
# Similarity: 696/702 (99.1%)
# Gaps: 0/702 ( 0.0%)
# Score: 3456.0
#
#
#=======================================
BSNT_00486___ 1 ATGGTAAAAGTCGGACTTGTAGATGATTATCGAGTAGATTTAGAGAAGCT 50
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU02740___na 1 ATGGTAAAAGTCGGACTTGTAGATGATTATCGAGTAGATTTAGAGAAGTT 50
BSNT_00486___ 51 GGAAGCGATCGTGTCCAGAATGCAGGACGTCGAAATTGTCTTTTCCACCG 100
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 51 AGAAGCGATCGTGTCCAGAATGCAGGACGTCGAAATTGTCTTTTCCACCG 100
BSNT_00486___ 101 ATTCAGCGAAGGAAGCCTACAGGCGGGTAAAGAACGGAGACATTGATCTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 101 ATTCAGCGAAGGAAGCCTACAGGCGGGTAAAGAACGGAGACATTGATCTG 150
BSNT_00486___ 151 CTGCTTGCCGATATCGAGATGCCCCATATGTCTGGCTACGAGCTTGCTGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 151 CTGCTTGCCGATATCGAGATGCCCCATATGTCTGGCTACGAGCTTGCTGA 200
BSNT_00486___ 201 TTTGATCAAATCCCATTCACTTGATGTGGATGTGATTTTTGTTACCGGCC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 201 TTTGATCAAATCCCATTCACTTGATGTGGATGTGATTTTTGTTACCGGCC 250
BSNT_00486___ 251 ACGGCGGTTATGCGGTTCACGCCTTTGACCTGAACGTCCATGATTATATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 251 ACGGCGGTTATGCGGTTCACGCCTTTGACCTGAACGTCCATGATTATATT 300
BSNT_00486___ 301 ATGAAGCCGTACTATGCCGACTGTCTGGCCGCTTCCTTCGACCGTTACTT 350
|||||||||||||||||||||.||||||||||||||||||||||.|||||
BSU02740___na 301 ATGAAGCCGTACTATGCCGACCGTCTGGCCGCTTCCTTCGACCGGTACTT 350
BSNT_00486___ 351 GAAAAAGAAAACGGAAACGAGTTTGAATGGGCGTATATTGATAAAGCAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 351 GAAAAAGAAAACGGAAACGAGTTTGAATGGGCGTATATTGATAAAGCAAA 400
BSNT_00486___ 401 AGTCTGAAATGCACGTCCTGCAAAAGAAGGATATTATTTTCGCAGAACGG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 401 AGTCTGAAATGCACGTCCTGCAAAAGAAGGATATTATTTTCGCAGAACGG 450
BSNT_00486___ 451 ACGGGACGTTCGACGACGATTGTGACAACCGCCGAAGAGGTGCAAACGTA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 451 ACGGGACGTTCGACGACGATTGTGACAACCGCCGAAGAGGTGCAAACGTA 500
BSNT_00486___ 501 TCAAACATTAAATGATATTAAAGGTGACCTGCCCGAAAAAGATTTTCTTC 550
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU02740___na 501 TCAAACATTAAATGATATTAAAGGCGACCTGCCCGAAAAAGATTTTCTTC 550
BSNT_00486___ 551 GTTCGCATCGTTCCTTTATTATCAACATTCATTACATAAAGCATTTTTCC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 551 GTTCGCATCGTTCCTTTATTATCAACATTCATTACATAAAGCATTTTTCC 600
BSNT_00486___ 601 TCTTATACCAAGCATTCATTCACAGTTTCCTTTGAGGGAACGTCTAAAAA 650
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 601 GCTTATACCAAGCATTCATTCACAGTTTCCTTTGAGGGAACGTCTAAAAA 650
BSNT_00486___ 651 AGCGATGATCACTAAGCAGCAGCTTGATTATTTTCAAAACTACTATTTTT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02740___na 651 AGCGATGATCACTAAGCAGCAGCTTGATTATTTTCAAAACTACTATTTTT 700
BSNT_00486___ 701 GA 702
||
BSU02740___na 701 GA 702
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