Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00497 and BSU02800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:39
# Commandline: needle
# -asequence dna-align/BSNT_00497___ycdC.1.22522.seq
# -bsequence dna-align/BSU02800___ycdC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00497___ycdC-BSU02800___ycdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00497___ycdC-BSU02800___ycdC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00497___ycdC
# 2: BSU02800___ycdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1500
# Identity: 1337/1500 (89.1%)
# Similarity: 1337/1500 (89.1%)
# Gaps: 138/1500 ( 9.2%)
# Score: 6585.0
#
#
#=======================================
BSNT_00497___ 1 ATGAAAGTAACAGAAAGAATCTCGAAAAACAATGACAATAATAGAAAAGG 50
BSU02800___yc 0 -------------------------------------------------- 0
BSNT_00497___ 51 ACCTTTCTTCACTTTAAATGAAGAAAGGTCTTTTTATATAATAAACAGGA 100
BSU02800___yc 0 -------------------------------------------------- 0
BSNT_00497___ 101 TTCTCTTTGTCGTAGACTCTTTGAAAGGGATGACTTCATTGGTTAATAAA 150
||||||||||||
BSU02800___yc 1 --------------------------------------TTGGTTAATAAA 12
BSNT_00497___ 151 CAGCTGAAAAAGAAGGCGCAGGAGATCGGAAATGTACCGACGCATTATGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 13 CAGCTGAAAAAGAAGGCGCAGGAGATCGGAAATGTACCGACGCATTATGA 62
BSNT_00497___ 201 GCTTGAGATAGAAGATTACGACCAAAAGCAAAAGAAGAACGGGCAGGCAT 250
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU02800___yc 63 GCTTGAGATAGAAGATTACGACCAAAAGCAAAAGAAGTACGGGCAGGCAT 112
BSNT_00497___ 251 ATTTTATCTGGAAGGACCCTAAAGATCCGGAAAAGCACATTACAGTTGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 113 ATTTTATCTGGAAGGACCCTAAAGATCCGGAAAAGCACATTACAGTTGAA 162
BSNT_00497___ 301 CTTAGAAATGACGGCGCTTTGCTCACCTTTTCAACAACTGTCCGCTCCGA 350
|||||||||||||||||.|||||||||||||||||||||||||.||||||
BSU02800___yc 163 CTTAGAAATGACGGCGCCTTGCTCACCTTTTCAACAACTGTCCACTCCGA 212
BSNT_00497___ 351 GACAGACAAACAACTTCCAGATGCCGAGCTGAAGCTGACGGCTCTTCAGT 400
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU02800___yc 213 GACAGACAAAAAACTTCCAGATGCCGAGCTGAAGCTGACGGCTCTTCAGT 262
BSNT_00497___ 401 TTGCCGCTGTCCATCATCCCGGCACATTTATGAATTTTCATTTTCAAGGC 450
|||||||||.|.||||||||||||||||||||||||||||||||||||||
BSU02800___yc 263 TTGCCGCTGCCAATCATCCCGGCACATTTATGAATTTTCATTTTCAAGGC 312
BSNT_00497___ 451 AAGGAAGAACGGGGGCAGCACATCCGGTTTGTCTATACCAAAATGGAGCT 500
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 313 AAGGAAGAAAGGGGGCAGCACATCCGGTTTGTCTATACCAAAATGGAGCT 362
BSNT_00497___ 501 GGGGCTTCCGATTCCCAATTCAGGCTTTTTAATTGATATGACACGCAGCG 550
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU02800___yc 363 GGGGCTTCCGATTCCCAATTCAGGCTTTTTAATTGATATGACACGAAGCG 412
BSNT_00497___ 551 GTCAGGTTGTCCACTTTCTATATTACGGGGAAGGGCATAAAGCCGAAGTT 600
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 413 GTCAGATTGTCCACTTTCTATATTACGGGGAAGGGCATAAAGCCGAAGTT 462
BSNT_00497___ 601 CCGACGGAATTTGTAGCAAAAGAGAAGGTTGTGTCCCATTACTTAAACAC 650
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU02800___yc 463 CCGACGGAATTTGTAGCAAAAGAGAAGGTTGTATCCCATTACTTAAACAC 512
BSNT_00497___ 651 AATGTCTTTTGAGCTGATGTACGATGTCATTGATGGCGAACAGGAACCAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 513 AATGTCTTTTGAGCTGATGTACGATGTCATTGATGGCGAACAGGAACCAA 562
BSNT_00497___ 701 GGCTTGTATATGAACCGATTCTCCCGGGATACAGCTATCCCGCAGATGTA 750
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU02800___yc 563 GGCTTGTATATGAACCGATTCTACCGGGATACAGCTATCCCGCAGATGTA 612
BSNT_00497___ 751 GACGAAATTGTGCCCGACCAGCATATCGCAGATGAAAGAATAGAAAACAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 613 GACGAAATTGTGCCCGACCAGCATATCGCAGATGAAAGAATAGAAAACAC 662
BSNT_00497___ 801 GGCGCCACTGCCGCCGCTTCAGAACAAGGAAGAAGTTGATATATTTGCCT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 663 GGCGCCACTGCCGCCGCTTCAGAACAAGGAAGAAGTTGATATATTTGCCT 712
BSNT_00497___ 851 TGCTGGGTTTTACCTCTGATATGCAGAAAGTCAGTGAAAGAGACTTTGGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 713 TGCTGGGTTTTACCTCTGATATGCAGAAAGTCAGTGAAAGAGACTTTGGA 762
BSNT_00497___ 901 GAACAAATTGGAAGCACATGGCGCAGAGGCGCTGCGCCGGAGCGTAAGGA 950
|||||||||||||||||.||||||||.|||||||||||||||||||||||
BSU02800___yc 763 GAACAAATTGGAAGCACGTGGCGCAGGGGCGCTGCGCCGGAGCGTAAGGA 812
BSNT_00497___ 951 TTTAAGCATAAGAAGCTATTTTGAAACGAGAAATAAAAACACAATCAAAA 1000
||||||||||.||||||||||||||||||||||||||||.||||||||||
BSU02800___yc 813 TTTAAGCATAGGAAGCTATTTTGAAACGAGAAATAAAAATACAATCAAAA 862
BSNT_00497___ 1001 TGAAGACGGATAAAAGAACCGGAAAATTAAAAGCAGCGCTTTCTTTTATG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 863 TGAAGACGGATAAAAGAACCGGAAAATTAAAAGCAGCGCTTTCTTTTATG 912
BSNT_00497___ 1051 GAGCGGCCGAACAACCGCCAATGCTCCACGGAAGAATGCCAAGAGATAGC 1100
||..|||.||||||||.|||||||||||||||||||||||||||||||||
BSU02800___yc 913 GACTGGCGGAACAACCTCCAATGCTCCACGGAAGAATGCCAAGAGATAGC 962
BSNT_00497___ 1101 GCTTCAATTTTTGTATGCCCTCTATCCGAGAGCGGCTGAGTTTTTCAGGG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 963 GCTTCAATTTTTGTATGCCCTCTATCCGAGAGCGGCTGAGTTTTTCAGGG 1012
BSNT_00497___ 1151 TGAATCCCGTCCGAATTGATGAAAGAGGGAGAGTCCGCAACCATTTTTCT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 1013 TGAATCCCGTCCGAATTGATGAAAGAGGGAGAGTCCGCAACCATTTTTCT 1062
BSNT_00497___ 1201 GTCTGGTATAAAGGAGTGCCGCTGCGGTTCGGCGCTGCCCGCATCATTGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 1063 GTCTGGTATAAAGGAGTGCCGCTGCGGTTCGGCGCTGCCCGCATCATTGT 1112
BSNT_00497___ 1251 CAATCCGGAAACTGGGTTGATTGACGCTTTTATGGCGCCTGATATTGAAC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 1113 CAATCCGGAAACTGGGTTGATTGACGCTTTTATGGCGCCTGATATTGAAC 1162
BSNT_00497___ 1301 CTGAACAATTGGAAGCGATAAATCACAGGCCGGATGTTTCCGCTGAAGAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 1163 CTGAACAATTGGAAGCGATAAATCACAGGCCGGATGTTTCCGCTGAAGAA 1212
BSNT_00497___ 1351 GCGAGAGAAGCGTTTTTAGCCGCTTTTGATGTGAAGCTGGAATGGCAGCC 1400
||||.||||||.|||||||||||||||||||||||.||||||||||||||
BSU02800___yc 1213 GCGAAAGAAGCATTTTTAGCCGCTTTTGATGTGAAACTGGAATGGCAGCC 1262
BSNT_00497___ 1401 TGACTTTACTGCAGGCAGTGACCAGCACTACAAACTTGTCTATAAGCCGG 1450
|||.|||||.|||||||||||||||||||.||||||||||||||||||||
BSU02800___yc 1263 TGATTTTACAGCAGGCAGTGACCAGCACTGCAAACTTGTCTATAAGCCGG 1312
BSNT_00497___ 1451 TTTACCCTTCCTATATTGATGCGCACATAAGGAAAAAGAAAAGGCTGTGA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02800___yc 1313 TTTACCCTTCCTATATTGATGCGCACATAAGGAAAAAGAAAAGGCTGTGA 1362
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