Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00498 and BSU02810

See Amino acid alignment / Visit BSNT_00498 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:39
# Commandline: needle
#    -asequence dna-align/BSNT_00498.1.22522.seq
#    -bsequence dna-align/BSU02810___cwlK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00498-BSU02810___cwlK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00498-BSU02810___cwlK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00498
# 2: BSU02810___cwlK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 504
# Identity:     391/504 (77.6%)
# Similarity:   391/504 (77.6%)
# Gaps:         108/504 (21.4%)
# Score: 1935.0
# 
#
#=======================================

BSNT_00498         0 --------------------------------------------------      0
                                                                       
BSU02810___cw      1 ATGAACTTACCCGCAAAAACATTTGTTATCTTATGTATTCTATTTCTTCT     50

BSNT_00498         0 --------------------------------------------------      0
                                                                       
BSU02810___cw     51 AGATCTTTGTTTTAGTTATATTCGGCATGAATGGCATTCTCAAAACGCCT    100

BSNT_00498         1 --------ATGCCTGTCCCCTCGGATCTTCATCCGATTGTGAAGCAGAAT     42
                             ||||||||||||||||||||||||||||||||||||||||||
BSU02810___cw    101 TGCAGGACATGCCTGTCCCCTCGGATCTTCATCCGATTGTGAAGCAGAAT    150

BSNT_00498        43 GCCGATGCACTCAAAGCCGCTGCAGCGAATAAAGGCATTACCGTCGTCAT     92
                     |||||||||||||||||||||||||||||||||||||||..|||||||||
BSU02810___cw    151 GCCGATGCACTCAAAGCCGCTGCAGCGAATAAAGGCATTGACGTCGTCAT    200

BSNT_00498        93 TACTGAAGGATTTAGGTCCTTTAAGGAACAAGATGAATTATATAAACAGG    142
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU02810___cw    201 TACTGAAGGATTCAGGTCCTTTAAGGAACAAGATGAATTATATAAACAGG    250

BSNT_00498       143 GACGTACAAAAAAAGGGAATATTGTCACCTATGCAAGAGGAGGGGAATCG    192
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02810___cw    251 GACGTACAAAAAAAGGGAATATTGTCACCTATGCAAGAGGAGGGGAATCG    300

BSNT_00498       193 TATCATAACTATGGTTTAGCGATTGATTTCGCCCTTCAAAAAAAGGATGG    242
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02810___cw    301 TATCATAACTATGGTTTAGCGATTGATTTCGCCCTTCAAAAAAAGGATGG    350

BSNT_00498       243 AAGCATCATATGGGATATGGAATATGACGGCAATCAAAACGGAAAATCAG    292
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU02810___cw    351 CAGCATCATATGGGATATGGAATATGACGGCAATCAAAACGGAAAATCAG    400

BSNT_00498       293 ATTGGCTGGAGGTTGTCGAGATCGCTAAGACACTCGGTTTTGAATGGGGC    342
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU02810___cw    401 ATTGGCTGGAGGTTGTCGAGATCGCTAAGACACTCGGTTTCGAATGGGGC    450

BSNT_00498       343 GGGGATTGGAAACGATTCAAGGACTACCCCCACTTGGAGATGATTCCTAA    392
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02810___cw    451 GGGGATTGGAAACGATTCAAGGACTACCCCCACTTGGAGATGATTCCTAA    500

BSNT_00498       393 CTAG    396
                     ||||
BSU02810___cw    501 CTAG    504


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