Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00563 and BSU03170

See Amino acid alignment / Visit BSNT_00563 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:44
# Commandline: needle
#    -asequence dna-align/BSNT_00563___ycgK.1.22522.seq
#    -bsequence dna-align/BSU03170___ycgK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00563___ycgK-BSU03170___ycgK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00563___ycgK-BSU03170___ycgK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00563___ycgK
# 2: BSU03170___ycgK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity:     957/977 (98.0%)
# Similarity:   957/977 (98.0%)
# Gaps:           4/977 ( 0.4%)
# Score: 4700.0
# 
#
#=======================================

BSNT_00563___      1 ATGGATATTAAAGTGATGGAATATGCAGTGGAAATTGCCCGGCGCCAAAG     50
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU03170___yc      1 ATGGATATTAAAGTGATGGAATATGCAGCGGAAATTGCCCGGCGCCAAAG     50

BSNT_00563___     51 CTTTACAAAGGCGGCGGAACATCTTCATATCGCACAGCCGTCTCTCAGCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc     51 CTTTACAAAGGCGGCGGAACATCTTCATATCGCACAGCCGTCTCTCAGCC    100

BSNT_00563___    101 AGCAAATCAAAAAGCTTGAGGCTGAGCTGAGGCTTACCCTTTTTCACAGA    150
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU03170___yc    101 AGCAAATCAAAAAGCTTGAGGCTGAGCTGGGGCTTACCCTTTTTCACAGA    150

BSNT_00563___    151 TCCCATGGCTCTGTTACACTGACACCTCACGGCAGGCGTTTCATTGAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    151 TCCCATGGCTCTGTTACACTGACACCTCACGGCAGGCGTTTCATTGAAAA    200

BSNT_00563___    201 AGCCGAGGACATCATTCGTTCCAGAGATGATTTGCTTCGGGAAATGCAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    201 AGCCGAGGACATCATTCGTTCCAGAGATGATTTGCTTCGGGAAATGCAGG    250

BSNT_00563___    251 AGAGATCACAGGGAATCGGTCATAAATTATCCATCGGGATTCCTGCTGTG    300
                     ||.||||||||||||||||||||||||||||||||||||||||||||||.
BSU03170___yc    251 AGCGATCACAGGGAATCGGTCATAAATTATCCATCGGGATTCCTGCTGTA    300

BSNT_00563___    301 ACAGGGAGATATCTCTTTCCTCCGCTGCTGAGGCAGTTTTTGGCGCGCTA    350
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU03170___yc    301 ACAGGGAGATATCTCTTTCCTCCGCTGCTGAAGCAGTTTTTGGCGCGCTA    350

BSNT_00563___    351 TCCTCATGTGGAGGTTCAGCTTGTTGAAAAAGATCCGGTTTCATTAGAGG    400
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU03170___yc    351 TCCTCATGTGGAGGTTCAGCTTGTTGAAAAAGATCCGGTTTCATTAGAGA    400

BSNT_00563___    401 AGATGACGGCAAAGGGAGAAGTTGACCTTTCTGTTTTATCCTTGCCGATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU03170___yc    401 AGATGACGGCAAAGGGAGAAGTTGACCTTTCTGTTTTATCCTTGCCCATC    450

BSNT_00563___    451 GAGGATGAACGGCTCTCCATTACACCTTTGCTCACGGAACCGATTGTTCT    500
                     ||||||||||||||||||||||||||.|||||||||||||||.|||||||
BSU03170___yc    451 GAGGATGAACGGCTCTCCATTACACCCTTGCTCACGGAACCGGTTGTTCT    500

BSNT_00563___    501 CGCAGTGCCGAAGGAAAAACAAAGGTGGATGCCGCCGGAATTGGTCGCGC    550
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    501 CGCGGTGCCGAAGGAAAAACAAAGGTGGATGCCGCCGGAATTGGTCGCGC    550

BSNT_00563___    551 TGATTGAGAAAGCGCTGGAAGGTAAG--GAGGGACGCCAGCCGTGTGTGC    598
                     |||||||||||||||||||||  |||  ||||||||||||||||||||||
BSU03170___yc    551 TGATTGAGAAAGCGCTGGAAG--AAGATGAGGGACGCCAGCCGTGTGTGC    598

BSNT_00563___    599 CGCTTGACATGGTAAGGAACGTGCCCTTTATTCTGTTAAAAGAAGGCTTC    648
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    599 CGATTGACATGGTAAGGAACGTGCCCTTTATTCTGTTAAAAGAAGGCTTC    648

BSNT_00563___    649 GGTTTTCGCAGGACAGTTCTCGATCTCTGTGCGGAAAGCGGCTTTAAGCC    698
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    649 GGCTTTCGCAGGACAGTTCTCGATCTCTGTGCGGAAAGCGGCTTTAAGCC    698

BSNT_00563___    699 GAATGCTGCCTTTAAGACGAGCCATATTGAAACCGCCCAATCTCTTGTGG    748
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    699 GAATGCTGCCTTTAAGACGAGCCATATTGAAACCGCCCAATCTCTTGTGG    748

BSNT_00563___    749 CTAACGGTTTAGGTGTGACAATGGCACCGAATATGGTCAGAAGGGATAAA    798
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    749 CTAACGGATTAGGTGTGACAATGGCACCGAATATGGTCAGAAGGGATAAA    798

BSNT_00563___    799 GATCCGGGGGTGATCTATTTATCGATTCAATCCGCGCCATCACGAACCCT    848
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU03170___yc    799 GATCCGGGTGTGATCTATTTATCGATTCAATCCGCGCCATCACGAACCCT    848

BSNT_00563___    849 CGTCTTTGTCTTTTTAAAGAACCGCTATGTCAGTCTGACCGCCCAGGCCT    898
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU03170___yc    849 CGTCTTTGTCTTTTTAAAGAACCGCTATGTCAGTCTGACGGCCCAGGCCT    898

BSNT_00563___    899 TTATGGAACTAACCCGGGAAAGTCTTAAACAAACGTTTGATGAAGGCTGT    948
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU03170___yc    899 TTATGGAACTAAGCCGGGAAAGTCTTAAACAAACGTTTGATGAAGGCTGT    948

BSNT_00563___    949 CTGGGAAACAAAGATGAAAATATTTAG    975
                     |||||||||||||||||||||||||||
BSU03170___yc    949 CTGGGAAACAAAGATGAAAATATTTAG    975


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