Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00580 and BSU03290

See Amino acid alignment / Visit BSNT_00580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:47
# Commandline: needle
#    -asequence dna-align/BSNT_00580___nasE.1.22522.seq
#    -bsequence dna-align/BSU03290___nasE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00580___nasE-BSU03290___nasE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00580___nasE-BSU03290___nasE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00580___nasE
# 2: BSU03290___nasE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     318/321 (99.1%)
# Similarity:   318/321 (99.1%)
# Gaps:           0/321 ( 0.0%)
# Score: 1578.0
# 
#
#=======================================

BSNT_00580___      1 ATGGTAAACAAAGACGTAACAAAAGTATGTATCGGAAAAATTGAAGAATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03290___na      1 ATGGTAAACAAAGACGTAACAAAAGTATGTATCGGAAAAATTGAAGAATT     50

BSNT_00580___     51 GCCTGAACAATTAGGCAAAACAGTGTATATTGAAGATAAGGAGCTCGCGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03290___na     51 GCCTGAACAATTAGGCAAAACAGTGTATATTGAAGATAAGGAGCTCGCGG    100

BSNT_00580___    101 TTTTCAAGCTTTCAGACGGAAGCATCCGCGCCATCGAAAACCGCTGTCCG    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU03290___na    101 TTTTCAAGCTTTCAGACGGAAGCATCCGCGCCATTGAAAACCGCTGTCCG    150

BSNT_00580___    151 CATAAGGGCGGCGTCCTGGCAGAAGGCATCGTCAGCGGTGAATATGTTTT    200
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU03290___na    151 CATAAGGGCGGCGTCCTGGCAGAAGGCATCGTCAGCGGTCAATATGTTTT    200

BSNT_00580___    201 CTGCCCGATGCACGACTGGAAAATTTCCTTAGAAGACGGAATCGTCCAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03290___na    201 CTGCCCGATGCACGACTGGAAAATTTCCTTAGAAGACGGAATCGTCCAAG    250

BSNT_00580___    251 AACCTGACCACGGATGTGTCAAAACATATGAAACGCTGATCGAAGGAGAA    300
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU03290___na    251 AACCTGACCACGGATGCGTCAAAACATATGAAACGCTGATCGAAGGAGAA    300

BSNT_00580___    301 CATGTTTATCTCGTATATTGA    321
                     |||||||||||||||||||||
BSU03290___na    301 CATGTTTATCTCGTATATTGA    321


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