Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00593 and BSU03359

See Amino acid alignment / Visit BSNT_00593 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:49
# Commandline: needle
#    -asequence dna-align/BSNT_00593.1.22522.seq
#    -bsequence dna-align/BSU03359___yczL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00593-BSU03359___yczL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00593-BSU03359___yczL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00593
# 2: BSU03359___yczL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity:     169/225 (75.1%)
# Similarity:   169/225 (75.1%)
# Gaps:          42/225 (18.7%)
# Score: 720.5
# 
#
#=======================================

BSNT_00593         1 ATGTTTGCGCTTTCCATCGGTTCAGCAACGCAAGTGGA---GCAATTGCT     47
                                        ||..|       |||.|||   || ||.|.|
BSU03359___yc      1 -------------------GTGAA-------AAGCGGAAAGGC-ATCGAT     23

BSNT_00593        48 TTATGCAAGCTGCGGTTTTCCGAATGTCGGCAAGGGCAGGGATTTGCGAT     97
                     |     |||    |.|.||.|   |||||||||.||||.|||||||||||
BSU03359___yc     24 T-----AAG----GATCTTGC---TGTCGGCAAAGGCAAGGATTTGCGAT     61

BSNT_00593        98 GGGGAAAAGGATTAAACGCGGTTGGAGCCTTTACTGATTTAGAAATCGGG    147
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU03359___yc     62 GGGGAAAAGGATTAAACGCGGTTGGAGTCTTTACTGATTTAGAAATCGGG    111

BSNT_00593       148 CAGCAGCGAGAAATGAGCGCGAAAAGCTGCTCTACACCATTGTACATATG    197
                     |.||||||||||||||||||||||||||||||||||||||||||||||.|
BSU03359___yc    112 CGGCAGCGAGAAATGAGCGCGAAAAGCTGCTCTACACCATTGTACATACG    161

BSNT_00593       198 GCGAAGTATACAATTTAAATCGTAA    222
                     |||||||||.|||||||||||||||
BSU03359___yc    162 GCGAAGTATTCAATTTAAATCGTAA    186


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