Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00616 and BSU03470
See
Amino acid alignment /
Visit
BSNT_00616 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:51
# Commandline: needle
# -asequence dna-align/BSNT_00616___hxlR.1.22522.seq
# -bsequence dna-align/BSU03470___hxlR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00616___hxlR-BSU03470___hxlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00616___hxlR-BSU03470___hxlR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00616___hxlR
# 2: BSU03470___hxlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 362/363 (99.7%)
# Similarity: 362/363 (99.7%)
# Gaps: 0/363 ( 0.0%)
# Score: 1806.0
#
#
#=======================================
BSNT_00616___ 1 TTGAGCCGGATGGACGACAAAAGGTTTAATTGTGAGAAGGAATTAACGCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03470___hx 1 TTGAGCCGGATGGACGACAAAAGGTTTAATTGTGAGAAGGAATTAACGCT 50
BSNT_00616___ 51 TGCAGTGATTGGCGGTAAATGGAAAATGCTCATTTTATGGCATTTAGGAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03470___hx 51 TGCAGTGATTGGCGGTAAATGGAAAATGCTCATTTTATGGCATTTAGGAA 100
BSNT_00616___ 101 AAGAAGGCACAAAACGGTTCAATGAATTAAAAACATTGATTCCTGATATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03470___hx 101 AAGAAGGCACAAAACGGTTCAATGAATTAAAAACATTGATTCCTGATATT 150
BSNT_00616___ 151 ACGCAGAAGATCCTCGTGAATCAGCTGAGAGAGCTTGAGCAGGATATGAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03470___hx 151 ACGCAGAAGATCCTCGTGAATCAGCTGAGAGAGCTTGAGCAGGATATGAT 200
BSNT_00616___ 201 TGTTCACAGGGAAGTGTATCCAGTTGTCCCGCCGAAGGTTGAATATTCTC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03470___hx 201 TGTTCACAGGGAAGTGTATCCAGTTGTCCCGCCGAAGGTTGAATATTCTC 250
BSNT_00616___ 251 TGACCCCGCACGGAGAAAGCCTCATGCCTATTCTTGAAGCCATGTATGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03470___hx 251 TGACCCCGCACGGAGAAAGCCTCATGCCTATTCTTGAAGCCATGTATGAG 300
BSNT_00616___ 301 TGGGGGAAAGGTTATATGGAATTGATTGATATCGACAAAAATGTCATGAA 350
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU03470___hx 301 TGGGGGAAAGGCTATATGGAATTGATTGATATCGACAAAAATGTCATGAA 350
BSNT_00616___ 351 AGAATCGTTGTAA 363
|||||||||||||
BSU03470___hx 351 AGAATCGTTGTAA 363
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.