Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00629 and BSU03540

See Amino acid alignment / Visit BSNT_00629 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:53
# Commandline: needle
#    -asequence dna-align/BSNT_00629___ycxB.1.22522.seq
#    -bsequence dna-align/BSU03540___ycxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00629___ycxB-BSU03540___ycxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00629___ycxB-BSU03540___ycxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00629___ycxB
# 2: BSU03540___ycxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     552/558 (98.9%)
# Similarity:   552/558 (98.9%)
# Gaps:           0/558 ( 0.0%)
# Score: 2736.0
# 
#
#=======================================

BSNT_00629___      1 ATGATTCAATATGCTAGTGAAAGTATCAATCTTCCAGGAGAAATCGCTTT     50
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU03540___yc      1 ATGATTCAATATGCTAGTGAAAGTATCAATCTTCCAGGAGAAATCACTTT     50

BSNT_00629___     51 TAAGGATGTAAGAGAAATCTTTTTTTATCAAATCGCAAAAATATCATGCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc     51 TAAGGATGTAAGAGAAATCTTTTTTTATCAAATCGCAAAAATATCATGCT    100

BSNT_00629___    101 TTTACTTTCTGTTGTTTTGCACCATATTTGCTGCAGTTAACTTCATTAAC    150
                     ||||||||||.|||||||||.|||||||||||||||||||||||||||||
BSU03540___yc    101 TTTACTTTCTATTGTTTTGCGCCATATTTGCTGCAGTTAACTTCATTAAC    150

BSNT_00629___    151 GGATGGCCCCGTATCGTTTATGGCAGTGACGCGCTTAACTTGTTTATGAA    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU03540___yc    151 GGATGGCCCCGTATCGTTTATGGAAGTGACGCGCTTAACTTGTTTATGAA    200

BSNT_00629___    201 CAGTATGTTGATTATCGTGATGTCCGTTCTGTTTACACTGCTGCTCCTCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    201 CAGTATGTTGATTATCGTGATGTCCGTTCTGTTTACACTGCTGCTCCTCC    250

BSNT_00629___    251 TTCTTCTATATGTGAAGTTTTCCAGAGCATACAAGAAGAACGAACGGATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    251 TTCTTCTATATGTGAAGTTTTCCAGAGCATACAAGAAGAACGAACGGATG    300

BSNT_00629___    301 AAATTGAAAAGAACATATACTCTGAACCAAGAAGGAATTCGTATATGTTC    350
                     ||||..||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    301 AAATCCAAAAGAACATATACTCTGAACCAAGAAGGAATTCGTATATGTTC    350

BSNT_00629___    351 TAAAAAATATGACCTCATTTTCAATTGGGATGAAATTACAGCTGTTTTCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    351 TAAAAAATATGACCTCATTTTCAATTGGGATGAAATTACAGCTGTTTTCG    400

BSNT_00629___    401 AATATAAAAATATCTTCAGGGTCAATACATCAAGTGGCCAATATATTGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    401 AATATAAAAATATCTTCAGGGTCAATACATCAAGTGGCCAATATATTGCG    450

BSNT_00629___    451 ATCCCCAAACATTTTTTTCACTCCGAAGAGGAGATGAACAGATTCAAGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    451 ATCCCCAAACATTTTTTTCACTCCGAAGAGGAGATGAACAGATTCAAGGA    500

BSNT_00629___    501 GATTATCCTTAAAAATACCGAAACAAAAAAACTCAAATTTAAAAAGGATC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03540___yc    501 GATTATCCTTAAAAATACCGAAACAAAAAAACTCAAATTTAAAAAGGATC    550

BSNT_00629___    551 AGCATTGA    558
                     ||||||||
BSU03540___yc    551 AGCATTGA    558


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