Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00662 and BSU03720

See Amino acid alignment / Visit BSNT_00662 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:57
# Commandline: needle
#    -asequence dna-align/BSNT_00662___gerKB.1.22522.seq
#    -bsequence dna-align/BSU03720___gerKB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00662___gerKB-BSU03720___gerKB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00662___gerKB-BSU03720___gerKB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00662___gerKB
# 2: BSU03720___gerKB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1123
# Identity:    1086/1123 (96.7%)
# Similarity:  1086/1123 (96.7%)
# Gaps:           2/1123 ( 0.2%)
# Score: 5270.0
# 
#
#=======================================

BSNT_00662___      1 ATGGAAAAAGCCAGAATAAGCATAAGGCAGCTGTTTGTCATGATTATCAT     50
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU03720___ge      1 ATGGAAAAAGCCAGAATAAGCATAAGGCAGTTGTTTGTCATGATTATCAT     50

BSNT_00662___     51 TTTTGAACTGGGCAGCTCCTTATTGATTACACCGGGATCAATGGCGGGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge     51 TTTTGAACTGGGCAGCTCCTTATTGATTACACCGGGATCAATGGCGGGCA    100

BSNT_00662___    101 GGGATGCTTGGATAGCAGTTTTATTAGGCTGTGCGATCGGACTGTTTCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    101 GGGATGCTTGGATAGCAGTTTTATTAGGCTGTGCGATCGGACTGTTTCTT    150

BSNT_00662___    151 TTCTGTTTGTATCAAGGCATTTATCAATGTTATCCGAATTCTTCTCCGAA    200
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    151 TTCTATTTGTATCAAGGCATTTATCAATGTTATCCGAATTCTTCTCCGAA    200

BSNT_00662___    201 AGAATATATGGATGATATGCTGGGAACCAAGCTGAGCTGGCTGTTTTCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    201 AGAATATATGGATGATATGCTGGGAACCAAGCTGAGCTGGCTGTTTTCAT    250

BSNT_00662___    251 TTCTCTATATATTGTACTTTGCCTATAATGCCGCAAGGGTGCTGCGTGAC    300
                     ||||||||||.||||||||||||||||.||||||||||||||||||||||
BSU03720___ge    251 TTCTCTATATCTTGTACTTTGCCTATATTGCCGCAAGGGTGCTGCGTGAC    300

BSNT_00662___    301 TTTGGAGAAATGCTGCTGACGTTTGCTTATCATGATACACCTATCATTAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    301 TTTGGAGAAATGCTGCTGACGTTTGCTTATCATGATACACCTATCATTAT    350

BSNT_00662___    351 TGTAAATGCTTTATTAATGGTAGTAAGCATATATGCCGTAAGAAAAGGAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    351 TGTAAATGCTTTATTAATGGTAGTAAGCATATATGCCGTAAGAAAAGGAA    400

BSNT_00662___    401 TTGAAGTACTCGCACGCGCTGCCGAACTTCTTTTCGGGGTCATGTATTTA    450
                     |||||||||||||||||||.|||||||||||||||||||.||||||||||
BSU03720___ge    401 TTGAAGTACTCGCACGCGCGGCCGAACTTCTTTTCGGGGCCATGTATTTA    450

BSNT_00662___    451 CTGGGCGCGATCGGGCTCGTGCTGATTATTGTCTCAGGCACTATAGACCC    500
                     ||||||||||||||.||.||||||||||||||||||||.|||||||||||
BSU03720___ge    451 CTGGGCGCGATCGGCCTTGTGCTGATTATTGTCTCAGGGACTATAGACCC    500

BSNT_00662___    501 GCACAATTTAAAGCCGGTTTTGGCAAACGGTATTTCTCCTATCCTTCACT    550
                     ||||||||||||||||||||||||||||||.|||||||||.|||||||||
BSU03720___ge    501 GCACAATTTAAAGCCGGTTTTGGCAAACGGCATTTCTCCTGTCCTTCACT    550

BSNT_00662___    551 CTGTTTTCACGCAGACCATGTACGTCCCATTTGGTGAAGTCGTTTTATTT    600
                     ||||||||||.||||||||||||||.||||||||||||||.|||||||||
BSU03720___ge    551 CTGTTTTCACACAGACCATGTACGTTCCATTTGGTGAAGTTGTTTTATTT    600

BSNT_00662___    601 GTGATGATTTTCCCTATCCTGAATAACAGAAAAGATGTAAAAAAAATGGG    650
                     ||||||||||||||||.|||||||.|||||||||||||.|||||||||||
BSU03720___ge    601 GTGATGATTTTCCCTAACCTGAATGACAGAAAAGATGTGAAAAAAATGGG    650

BSNT_00662___    651 GATGATTGCCATGGCTATTAGCGGATTGGTTGTGGCGCTCACCGTGGCGA    700
                     ||||||.|||||||||||||||||||||.|||||||||||||||||||||
BSU03720___ge    651 GATGATCGCCATGGCTATTAGCGGATTGATTGTGGCGCTCACCGTGGCGA    700

BSNT_00662___    701 TTAATATCAGCGTGCTTGATGTTGATCTTACACTCAGATCCCAGTTCCCG    750
                     |||||||.||||||||||||||||||||||||||||||||||||||.|||
BSU03720___ge    701 TTAATATTAGCGTGCTTGATGTTGATCTTACACTCAGATCCCAGTTTCCG    750

BSNT_00662___    751 CTTTTAAGTACGATCCAGACAATCAAGGTCGAAGAATTTTTAGACCGGCT    800
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    751 CTTTTAAGCACGATCCAGACAATCAAGGTCGAAGAATTTTTAGACCGGCT    800

BSNT_00662___    801 CGATGTCTTTTTTATGCTGGCGCTGATCATCGGCGGCTTCTTTAAGGTTA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU03720___ge    801 CGATGTCTTTTTTATGCTGGCGCTGATCATCGGCGGCTTCTTTAAGGTCA    850

BSNT_00662___    851 GCCTCTACTTATATGCCACTGTGGTTGGGACATCTACGCTCTTTAAGGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    851 GCCTCTACTTATATGCCACTGTGGTTGGGACATCTACGCTCTTTAAGGAA    900

BSNT_00662___    901 AAGAATCTCTCTCAATTGGCTTATCCGATGGGATTGGGCATCTTAATCCT    950
                     |||||.|.||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge    901 AAGAACCCCTCTCAATTGGCTTATCCGATGGGATTGGGCATCTTAATCCT    950

BSNT_00662___    951 TTCTTTAACGATCGCAACTAACTTTTCAGAGCACTTGAACGAAGGCTTGA   1000
                     ||||.||||||||||.|||||||||||.|||||||||||.||||||.|||
BSU03720___ge    951 TTCTATAACGATCGCGACTAACTTTTCGGAGCACTTGAATGAAGGCCTGA   1000

BSNT_00662___   1001 ACGTGGTGCCGCTGTATATTCATTTGCCTTTTCAATTATTGTTTCCGCTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03720___ge   1001 ACGTGGTGCCGCTGTATATTCATTTGCCTTTTCAATTATTGTTTCCGCTC   1050

BSNT_00662___   1051 TTTCTGTTTATTGTGGCTGTTTGGAAAAAGAAACGAAGAGAGAAGTCAAA   1100
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU03720___ge   1051 TTTCTGTTTATTGTGGCCGTTTGGAAAAAGAAACGAAGAGAGAAGTCAAA   1100

BSNT_00662___   1101 AGGGACAGGAA-TAAAGGAATGA   1122
                     |||| .||||| .|||..|||||
BSU03720___ge   1101 AGGG-GAGGAAGCAAAAAAATGA   1122


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