Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00681 and BSU03860

See Amino acid alignment / Visit BSNT_00681 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:59
# Commandline: needle
#    -asequence dna-align/BSNT_00681___ycnD.1.22522.seq
#    -bsequence dna-align/BSU03860___ycnD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00681___ycnD-BSU03860___ycnD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00681___ycnD-BSU03860___ycnD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00681___ycnD
# 2: BSU03860___ycnD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity:     744/750 (99.2%)
# Similarity:   744/750 (99.2%)
# Gaps:           0/750 ( 0.0%)
# Score: 3696.0
# 
#
#=======================================

BSNT_00681___      1 ATGAATGAAGTGATTAAATCTTTAACAGACCACCGCTCGATTCGCAGCTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc      1 ATGAATGAAGTGATTAAATCTTTAACAGACCACCGCTCGATTCGCAGCTA     50

BSNT_00681___     51 CATAGATGAGCCTGTAGCTCAGGAGCAATTGGACCAAATCATTGAAGCGG    100
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc     51 CACAGATGAGCCTGTAGCTCAGGAGCAATTGGACCAAATCATTGAAGCGG    100

BSNT_00681___    101 TGCAATCAGCCCCTTCTTCTATCAACGGACAGCAAGTGACTGTGATCACA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    101 TGCAATCAGCCCCTTCTTCTATCAACGGACAGCAAGTGACTGTGATCACA    150

BSNT_00681___    151 GTCCAGGATAAAGAGCGTAAAAAGAAAATCTCCGAGCTGGCAGGCGGCCA    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU03860___yc    151 GTCCAGGATAAAGAGCGCAAAAAGAAAATCTCCGAGCTGGCAGGCGGCCA    200

BSNT_00681___    201 GCCATGGATCGATCAAGCTCCTGTTTTCCTGCTGTTCTGCGCAGATTTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU03860___yc    201 GCCATGGATCGATCAAGCTCCTGTTTTCCTGCTGTTCTGCGCAGATTTTA    250

BSNT_00681___    251 ACCGGGCCAAAATTGCGCTTGAAGATCTGCATGATTTCAAAATGGAAATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    251 ACCGGGCCAAAATTGCGCTTGAAGATCTGCATGATTTCAAAATGGAAATC    300

BSNT_00681___    301 ACAAATGGATTGGAATCTGTTCTTGTCGGCGCAGTAGACGCTGGTATTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    301 ACAAATGGATTGGAATCTGTTCTTGTCGGCGCAGTAGACGCTGGTATTGC    350

BSNT_00681___    351 CCTCGGCACAGCAACAGCAGCGGCTGAGTCACTCGGACTTGGCACAGTTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    351 CCTCGGCACAGCAACAGCAGCGGCTGAGTCACTCGGACTTGGCACAGTTC    400

BSNT_00681___    401 CGATCGGTGCGGTTCGCGGAAACCCTCAAGAGCTGATCGAACTGCTTGAG    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU03860___yc    401 CGATCGGTGCAGTTCGCGGAAACCCTCAAGAGCTGATCGAACTGCTTGAG    450

BSNT_00681___    451 CTTCCAAAATACGTGTTCCCTTTATCCGGCCTTGTCATTGGGCATCCTGC    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    451 CTTCCGAAATACGTGTTCCCTTTATCCGGCCTTGTCATTGGGCATCCTGC    500

BSNT_00681___    501 CGACCGTTCAGCGAAAAAACCGCGCTTGCCGCAGGAAGCTGTCAATCATC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    501 CGACCGTTCAGCGAAAAAACCGCGCTTGCCGCAGGAAGCTGTCAATCATC    550

BSNT_00681___    551 AGGAAACTTATTTGAATCAGGATGAGCTGACGTCTCACATTCAGGCATAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    551 AGGAAACTTATTTGAATCAGGATGAGCTGACGTCTCACATTCAGGCATAC    600

BSNT_00681___    601 GACGAACAGATGTCTGAATACATGAATAAACGGACAAACGGAAAAGAAAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    601 GACGAACAGATGTCTGAATACATGAATAAACGGACAAACGGAAAAGAAAC    650

BSNT_00681___    651 AAGAAATTGGTCACAGAGCATCGCTTCCTACTATGAGCGCCTGTACTATC    700
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    651 AAGAAACTGGTCACAGAGCATCGCTTCCTACTATGAGCGCCTGTACTATC    700

BSNT_00681___    701 CGCACATCCGTGAAATGCTTGAAAAACAAGGATTTAAAGTTGAAAAATAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03860___yc    701 CGCACATCCGTGAAATGCTTGAAAAACAAGGATTTAAAGTTGAAAAATAA    750


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