Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00689 and BSU03920

See Amino acid alignment / Visit BSNT_00689 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:00
# Commandline: needle
#    -asequence dna-align/BSNT_00689___glcU.1.22522.seq
#    -bsequence dna-align/BSU03920___glcU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00689___glcU-BSU03920___glcU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00689___glcU-BSU03920___glcU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00689___glcU
# 2: BSU03920___glcU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 864
# Identity:     858/864 (99.3%)
# Similarity:   858/864 (99.3%)
# Gaps:           0/864 ( 0.0%)
# Score: 4266.0
# 
#
#=======================================

BSNT_00689___      1 ATGGATTTATTATTGGCTCTTCTCCCGGCTTTGTTTTGGGGGAGCATTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl      1 ATGGATTTATTATTGGCTCTTCTCCCGGCTTTGTTTTGGGGGAGCATTGT     50

BSNT_00689___     51 TCTCTTCAATGTGAAATTAGGCGGCGGGCCGTACAGCCAGACACTGGGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl     51 TCTCTTCAATGTGAAATTAGGCGGCGGGCCGTACAGCCAGACACTGGGAA    100

BSNT_00689___    101 CGACGATCGGGGCACTCATTGTTTCTATCGTTATTTACTTTTTTGTTCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    101 CGACGATCGGGGCACTCATTGTTTCTATCGTTATTTACTTTTTTGTTCAG    150

BSNT_00689___    151 CCCGTTCTGTCACTTCGCATTTTTATTGTTGGAATCGTATCCGGCTTATT    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU03920___gl    151 CCCGTTCTGTCCCTTCGCATTTTTATTGTTGGAATCGTATCCGGCTTATT    200

BSNT_00689___    201 TTGGTCACTTGGACAGGCCAACCAGCTGAAAAGCATTCAATTGATGGGCG    250
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU03920___gl    201 TTGGTCACTTGGACAGGCCAACCAGTTGAAAAGCATTCAATTGATGGGCG    250

BSNT_00689___    251 TGTCGAAAACAATGCCGATTTCCACAGGAATGCAGCTCGTTTCCACCTCA    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU03920___gl    251 TGTCGAAAACAATGCCGATTTCCACAGGAATGCAGCTCGTTTCCACCTCG    300

BSNT_00689___    301 TTGTTCGGTGTGATCGTGTTCCGCGAATGGTCAACACCGATTGCGATTAC    350
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    301 CTGTTCGGTGTGATCGTGTTCCGCGAATGGTCAACACCGATTGCGATTAC    350

BSNT_00689___    351 GCTTGGCGTTCTCGCTTTGATCTTTATCATTGTGGGAATCATTCTCACGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    351 GCTTGGCGTTCTCGCTTTGATCTTTATCATTGTGGGAATCATTCTCACGT    400

BSNT_00689___    401 CCTTGGAAGATAAGAATGATAAAAAAGAGGGCGAGCCAAGCAATTTGAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    401 CCTTGGAAGATAAGAATGATAAAAAAGAGGGCGAGCCAAGCAATTTGAAA    450

BSNT_00689___    451 AAGGGCATTTTGATTCTCCTTGTTTCGACTCTTGGTTATTTGGTTTATGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    451 AAGGGCATTTTGATTCTCCTTGTTTCGACTCTTGGTTATTTGGTTTATGT    500

BSNT_00689___    501 AGTCGTGGCTAGATTATTCAATGTGTCCGGCTGGTCCGCGCTGCTGCCAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    501 AGTCGTGGCTAGATTATTCAATGTGTCCGGCTGGTCCGCGCTGCTGCCAC    550

BSNT_00689___    551 AGGCAATTGGCATGGTGGTCGGGGGGTTAGTTTTAACCTATAGACACAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    551 AGGCAATTGGCATGGTGGTCGGGGGGTTAGTTTTAACCTATAGACACAAA    600

BSNT_00689___    601 CCCTTTAACAAGTATGCGATCAGAAATATTCTCCCAGGGTTAATCTGGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    601 CCCTTTAACAAGTATGCGATCAGAAATATTCTCCCAGGGTTAATCTGGGC    650

BSNT_00689___    651 AGGCGGAAATATGTTTTTGTTTATTTCTCAGCCGCGAGTCGGCGTTGCAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    651 AGGCGGAAATATGTTTTTGTTTATTTCTCAGCCGCGAGTCGGCGTTGCAA    700

BSNT_00689___    701 CGAGCTTTTCCCTTTCACAAATGGGAATTGTCATTTCTACGCTCGGCGGT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU03920___gl    701 CGAGCTTTTCCCTTTCACAAATGGGAATTGTCATTTCTACGCTCGGCGGT    750

BSNT_00689___    751 ATTTTCATCCTGCGTGAAAAGAAAACGAAACGTCAGCTAATAGCAATTGC    800
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU03920___gl    751 ATTTTCATCCTGCGTGAAAAGAAAACGAAACGCCAGCTAATAGCAATTGC    800

BSNT_00689___    801 GATCGGGATTATCCTGATTATTGCTGCCGCCGTATTCTTAGGAATCGCCA    850
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU03920___gl    801 GATCGGGATTATCCTGATTATTGCCGCCGCCGTATTCTTAGGAATCGCCA    850

BSNT_00689___    851 AAACAAATTCATAA    864
                     ||||||||||||||
BSU03920___gl    851 AAACAAATTCATAA    864


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