Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00709 and BSU04040

See Amino acid alignment / Visit BSNT_00709 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:03
# Commandline: needle
#    -asequence dna-align/BSNT_00709___ycsE.1.22522.seq
#    -bsequence dna-align/BSU04040___ycsE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00709___ycsE-BSU04040___ycsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00709___ycsE-BSU04040___ycsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00709___ycsE
# 2: BSU04040___ycsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 750
# Identity:     746/750 (99.5%)
# Similarity:   746/750 (99.5%)
# Gaps:           0/750 ( 0.0%)
# Score: 3714.0
# 
#
#=======================================

BSNT_00709___      1 ATGTCTGTTCAAAGAGAAGATGTAGATATCAAGCTGATCGCAATTGATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc      1 ATGTCTGTTCAAAGAGAAGATGTAGATATCAAGCTGATCGCAATTGATAT     50

BSNT_00709___     51 GGATGGTACACTGCTGAACGACGAGCAGCTGATCTCGGATGAAAACCGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc     51 GGATGGTACACTGCTGAACGACGAGCAGCTGATCTCGGATGAAAACCGCA    100

BSNT_00709___    101 AAGCCATTCGTGAAGCGGAGGATAAAGGTGTGTATGTGGTGATCAGCACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    101 AAGCCATTCGTGAAGCGGAGGATAAAGGTGTGTATGTGGTGATCAGCACG    150

BSNT_00709___    151 GGCCGGACGCTGATGACGTGCCGGGAGCTGGCGGAATCGCTAAAGCTGTC    200
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04040___yc    151 GGCCGGACGCTGATGACGTGCAGGGAGCTGGCGGAATCGCTAAAGCTGTC    200

BSNT_00709___    201 ATCCTTTCTAATCACGGCAAACGGCAGTGAAATTTGGGATTCGAATTTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    201 ATCCTTTCTAATCACGGCAAACGGCAGTGAAATTTGGGATTCGAATTTTA    250

BSNT_00709___    251 ATTTGGTGGAACGGAAGCTGCTTCATACGGACCATATTCAAATGATGTGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    251 ATTTGGTGGAACGGAAGCTGCTTCATACGGACCATATTCAAATGATGTGG    300

BSNT_00709___    301 GATTTGCGGAATAAGCACAACACTAATTTCTGGGCTTCTACGGTGAATAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    301 GATTTGCGGAATAAGCACAACACTAATTTCTGGGCTTCTACGGTGAATAA    350

BSNT_00709___    351 AGTATGGAGAGGCGAGTTTCCGGAAAACATTACGGATCATGAATGGCTCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    351 AGTATGGAGAGGCGAGTTTCCGGAAAACATTACGGATCATGAATGGCTCA    400

BSNT_00709___    401 AATTCGGCTTTGACATTGAGGATGACGATATCCGAAACGAAGTGCTTCAG    450
                     ||||||||||||||||.||||||||||||||||||||||||||||||.||
BSU04040___yc    401 AATTCGGCTTTGACATCGAGGATGACGATATCCGAAACGAAGTGCTTGAG    450

BSNT_00709___    451 GAGCTGAGAAAAAACAAAGAGCTCGAAATCACAAATTCAAGTCCGACAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    451 GAGCTGAGAAAAAACAAAGAGCTCGAAATCACAAATTCAAGTCCGACAAA    500

BSNT_00709___    501 CATTGAAGTCAACGCGCTTGGCATCAACAAAGCTGCAGCCCTTGCCAAGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    501 CATTGAAGTCAACGCGCTTGGCATCAACAAAGCTGCAGCCCTTGCCAAGG    550

BSNT_00709___    551 TTACGGAAAAACTCGGCATTACAATGGAGAATGTGATGGCGATGGGCGAC    600
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU04040___yc    551 TTACGGAAAAACTCGGCTTTACAATGGAGAATGTGATGGCGATGGGCGAC    600

BSNT_00709___    601 AGCCTTAATGACATTGCGATGATCAAAGAAGCGGGTCTTGGCGTCGCAAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    601 AGCCTTAATGACATTGCGATGATCAAAGAAGCGGGTCTTGGCGTCGCAAT    650

BSNT_00709___    651 GGGCAATGCGCAAGACATCGTAAAAGAAACGGCTGATTATATCACGGATA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    651 GGGCAATGCGCAAGACATCGTAAAAGAAACGGCTGATTATATCACGGATA    700

BSNT_00709___    701 CAAATATTGAGGATGGTGTCGCTAAAGCGATTCGCCATTGGGTACTATAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04040___yc    701 CAAATATTGAGGATGGTGTCGCTAAAGCGATTCGCCATTGGGTACTATAA    750


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