Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00744 and BSU04340

See Amino acid alignment / Visit BSNT_00744 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:07
# Commandline: needle
#    -asequence dna-align/BSNT_00744___ydaP.1.22522.seq
#    -bsequence dna-align/BSU04340___ydaP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00744___ydaP-BSU04340___ydaP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00744___ydaP-BSU04340___ydaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00744___ydaP
# 2: BSU04340___ydaP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1725
# Identity:    1692/1725 (98.1%)
# Similarity:  1692/1725 (98.1%)
# Gaps:           0/1725 ( 0.0%)
# Score: 8328.0
# 
#
#=======================================

BSNT_00744___      1 ATGGCACACAAAACTGCAGGACAAGCAATGACAGAGCTGCTTGAGCAATG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd      1 ATGGCACACAAAACTGCAGGACAAGCAATGACAGAGCTGCTTGAGCAATG     50

BSNT_00744___     51 GGGAGTTGATCATGTATACGGCATCCCCGGAGACAGTATAAATGAGTTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd     51 GGGAGTTGATCATGTATACGGCATCCCCGGAGACAGTATAAATGAGTTTA    100

BSNT_00744___    101 TCGAAGAATTAAGACACGAAAGAAATCAACTGAAGTTCATTCAAACCCGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    101 TCGAAGAATTAAGACACGAAAGAAATCAACTGAAGTTCATTCAAACCCGC    150

BSNT_00744___    151 CACGAAGAGGTAGCGGCACTGGCAGCCGCGGCTGAAGCAAAACTCACCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    151 CACGAAGAGGTAGCGGCACTGGCAGCCGCGGCTGAAGCAAAACTCACCGG    200

BSNT_00744___    201 CAAGATCGGAGTCTGTCTGTCAATCGCAGGGCCGGGAGCGGTGCACTTAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    201 CAAGATCGGAGTCTGTCTGTCAATCGCAGGGCCGGGAGCGGTGCACTTAT    250

BSNT_00744___    251 TAAATGGTTTATATGATGCTAAAGCCGACGGCGCCCCTGTGCTGGCGATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    251 TAAATGGTTTATATGATGCTAAAGCCGACGGCGCCCCTGTGCTGGCGATT    300

BSNT_00744___    301 GCAGGACAGGTTTCTTCTGGCGAAGTCGGACGGGACTATTTCCAGGAGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    301 GCAGGACAGGTTTCTTCTGGCGAAGTCGGACGGGACTATTTCCAGGAGAT    350

BSNT_00744___    351 TAAGCTGGAGCAAATGTTTGAGGACGTGGCCGTGTTCAACAGAGAGGTAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    351 TAAGCTGGAGCAAATGTTTGAGGACGTGGCCGTGTTCAACAGAGAGGTAC    400

BSNT_00744___    401 ATAGCGCGGAATCACTTCCGGATCTCTTAAATCAGGCGATCAGGACCGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    401 ATAGCGCGGAATCACTTCCGGATCTCTTAAATCAGGCGATCAGGACCGCC    450

BSNT_00744___    451 TACAGCAAAAAAGGCGTTGCGGTATTGAGCGTGTCAGATGATTTGTTTGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    451 TACAGCAAAAAAGGCGTTGCGGTATTGAGCGTGTCAGATGATTTGTTTGC    500

BSNT_00744___    501 GGAGAAAATCAAACGGGAGCCCGTGTATACTTCACCGGTGTATATTGAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    501 GGAGAAAATCAAACGGGAGCCCGTGTATACTTCACCGGTGTATATTGAAG    550

BSNT_00744___    551 GGAACCTTGAACCGAAAAAAGAACAGCTCGTCACCTGCGCCCAATATATT    600
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    551 GGAACCTAGAACCGAAAAAAGAACAGCTCGTCACCTGCGCCCAATATATT    600

BSNT_00744___    601 AATAACGCTAAGAAACCGATTATCCTGGCAGGGCAGGGAATGAAAAAGGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    601 AATAACGCTAAGAAACCGATTATCCTGGCAGGGCAGGGAATGAAAAAGGC    650

BSNT_00744___    651 GAAACGGGAGCTCTTAGAATTTGCGGACAAAGCCGCCGCTCCGATCGTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    651 GAAACGGGAGCTCTTAGAATTTGCGGACAAAGCCGCCGCTCCGATCGTTG    700

BSNT_00744___    701 TTACACTCCCGGCAAAAGGTGTCGTTCCCGATAAGCACCCGCATTTTCTC    750
                     ||||||||||||||||.|||||.|||||||||||||||||.|||||||||
BSU04340___yd    701 TTACACTCCCGGCAAAGGGTGTTGTTCCCGATAAGCACCCACATTTTCTC    750

BSNT_00744___    751 GGCAACCTCGGGCAGATCGGAACAAAGCCGGCTTACGAGGCAATGGAGGA    800
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04340___yd    751 GGCAACCTCGGTCAGATCGGAACAAAGCCGGCTTACGAGGCAATGGAGGA    800

BSNT_00744___    801 ATGTGATTTATTAATCATGCTCGGAACATCATTCCCGTACCGTGATTATT    850
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU04340___yd    801 ATGTGATTTATTAATCATGCTCGGAACGTCATTCCCGTACCGTGATTATT    850

BSNT_00744___    851 TGCCTGATGACACGCCGGCAATCCAGCTCGATTCAGACCCGGCAAAAATC    900
                     |||||||||||||||||||.||.|||||||||||||||||||||||||||
BSU04340___yd    851 TGCCTGATGACACGCCGGCGATACAGCTCGATTCAGACCCGGCAAAAATC    900

BSNT_00744___    901 GGAAAACGGTATCCGGTGACAGCGGGCCTTGTCTGCGATTCGGCTCTCGG    950
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU04340___yd    901 GGAAAACGGTATCCGGTGACAGCGGGCCTTGTCTGTGATTCGGCTCTCGG    950

BSNT_00744___    951 TCTGCGCGAATTGACAGAGTATATTGAACGCAAGGAAGACAGAAGATTCC   1000
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd    951 TTTGCGCGAATTGACAGAGTATATTGAACGCAAGGAAGACAGAAGATTCC   1000

BSNT_00744___   1001 TGAATGCCTGCACAGAACATATGCAGCATTGGTGGAACGAAATTGAAAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd   1001 TGAATGCCTGCACAGAACATATGCAGCATTGGTGGAACGAAATTGAAAAA   1050

BSNT_00744___   1051 GATGAGACAGAGGCAACAACACCGCTTAAACCTCAGCAGGTCGTGGCCCG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd   1051 GATGAGACAGAGGCAACAACACCGCTTAAACCTCAGCAGGTCGTGGCCCG   1100

BSNT_00744___   1101 TCTTCAGGAAGCGGCAGCCGATGATGCGGTGCTCTCTGTCGATGTCGGCA   1150
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU04340___yd   1101 TCTTCAGGAAGCGGCAGCCGATGATGCGGTGCTCTCTGTAGATGTCGGCA   1150

BSNT_00744___   1151 CTGTGACAGTCTGGATGGCGCGTCATTTCAAAATGAACGCGAACCAGGAT   1200
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU04340___yd   1151 CTGTGACAGTCTGGATGGCGCGTCATTTCAAAATGAACGCGAATCAGGAT   1200

BSNT_00744___   1201 TTCATCGTCTCCAGCTGGCTTGCGACAATGGGCTGCGGCCTGCCGGGAGC   1250
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU04340___yd   1201 TTCATCGTTTCCAGCTGGCTTGCGACAATGGGCTGCGGCCTGCCGGGAGC   1250

BSNT_00744___   1251 GATCGCCGCAAGCTTGTCCGAACCGGAACGCCAGGCGATCGCTGTCTGTG   1300
                     |||.||.||.||||||||||||||||||||||||||||||||.|||||.|
BSU04340___yd   1251 GATTGCAGCGAGCTTGTCCGAACCGGAACGCCAGGCGATCGCCGTCTGCG   1300

BSNT_00744___   1301 GTGACGGGGGATTTTCCATGGTCATGCAGGATCTTCCGACCGCTGTCAAA   1350
                     |||||||||||||||||||||||||||||||.|||||||||||.||.|||
BSU04340___yd   1301 GTGACGGGGGATTTTCCATGGTCATGCAGGACCTTCCGACCGCCGTTAAA   1350

BSNT_00744___   1351 TATAAGCTCCCGATCACAGTCGTCATTTTAAACAACGAAAATCTTGGTAT   1400
                     |||||||||||||||||||||||.||||||||||||||||||||.||.||
BSU04340___yd   1351 TATAAGCTCCCGATCACAGTCGTTATTTTAAACAACGAAAATCTCGGCAT   1400

BSNT_00744___   1401 GATTGAGTACGAGCAGCAGGTCAAAGGCAATATCGACTATGTCACAAAAC   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd   1401 GATTGAGTACGAGCAGCAGGTCAAAGGCAATATCGACTATGTCACAAAAC   1450

BSNT_00744___   1451 TTCAAAATGTCGACTATGCCGCATTTGCAGAAAGCTGCGGAGCAAAGGGC   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04340___yd   1451 TTCAAAATGTCGACTATGCCGCATTTGCAGAAAGCTGCGGAGCAAAGGGC   1500

BSNT_00744___   1501 ATCAAAGTGACTAAAGCGGAAGAGCTTGCGCCGGCATTCCATGAGGCGCT   1550
                     |||||||||||.|||||||||||||||||||||||.||.|||||||||||
BSU04340___yd   1501 ATCAAAGTGACCAAAGCGGAAGAGCTTGCGCCGGCTTTTCATGAGGCGCT   1550

BSNT_00744___   1551 GCACTCTGACCAACCGGTCGTTGTGGATGTCATGATTGGAAACGAACCGC   1600
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04340___yd   1551 GCACTCTGACCAACCGGTCGTAGTGGATGTCATGATTGGAAACGAACCGC   1600

BSNT_00744___   1601 CGCTTCCTGGCAAAATCACATACGGGCAGGCGAAAGGTTTTAGCAAATAC   1650
                     |||||||||||||||||||.|||||||||||||||||.||||||||.|||
BSU04340___yd   1601 CGCTTCCTGGCAAAATCACCTACGGGCAGGCGAAAGGCTTTAGCAAGTAC   1650

BSNT_00744___   1651 ATGCTGAAAAACTTCTTCGAAAACCAAAAAATTGAAATGCCGTCACTGAA   1700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04340___yd   1651 ATGCTGAAAAACTTCTTCGAAAACCAAAAATTTGAAATGCCGTCACTGAA   1700

BSNT_00744___   1701 GAAAAGTTTGAAACGGTTATTTTAG   1725
                     ||||||||||||||||||||||||.
BSU04340___yd   1701 GAAAAGTTTGAAACGGTTATTTTAA   1725


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