Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00757 and BSU04390

See Amino acid alignment / Visit BSNT_00757 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:08
# Commandline: needle
#    -asequence dna-align/BSNT_00757___ydbA.1.22522.seq
#    -bsequence dna-align/BSU04390___ydbA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00757___ydbA-BSU04390___ydbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00757___ydbA-BSU04390___ydbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00757___ydbA
# 2: BSU04390___ydbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 819
# Identity:     813/819 (99.3%)
# Similarity:   813/819 (99.3%)
# Gaps:           0/819 ( 0.0%)
# Score: 4041.0
# 
#
#=======================================

BSNT_00757___      1 GTGCCAACAGAACGAAAAGAAGACTTACATCAGCAATTAAAAGAGATAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd      1 GTGCCAACAGAACGAAAAGAAGACTTACATCAGCAATTAAAAGAGATAGA     50

BSNT_00757___     51 GAAATGGGAAAAAGATCAGCAAAAAGTCTGGTTTTGGGAAAAGCTCAGCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd     51 GAAATGGGAAAAAGATCAGCAAAAAGTCTGGTTTTGGGAAAAGCTCAGCC    100

BSNT_00757___    101 GTCTCCCGTTTCAGCTGCTGGACAAGCTGACACCGGAATTCATCCAGAAA    150
                     |||||||||||||.||.|||||||||||||||||.|||||||||||||||
BSU04390___yd    101 GTCTCCCGTTTCAACTCCTGGACAAGCTGACACCAGAATTCATCCAGAAA    150

BSNT_00757___    151 AAGATCGGCAAGCTCTTGGATGAGGTCGGCAGCTTTGTTCAAACAGGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    151 AAGATCGGCAAGCTCTTGGATGAGGTCGGCAGCTTTGTTCAAACAGGCGG    200

BSNT_00757___    201 ACAGTACCTGACATCTGAAAAACAGATTATCAGGATGTTTCAAAAGAAAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    201 ACAGTACCTGACATCTGAAAAACAGATTATCAGGATGTTTCAAAAGAAAC    250

BSNT_00757___    251 TGCCGGAGGAGATCTTTGAATCGCTGGAGGACATCCGGAAAGCGCCTCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    251 TGCCGGAGGAGATCTTTGAATCGCTGGAGGACATCCGGAAAGCGCCTCTT    300

BSNT_00757___    301 CCTGTCATGGATGAAATTGCGGAAGGAATGGGCAAAAACAGAACCAACGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    301 CCTGTCATGGATGAAATTGCGGAAGGAATGGGCAAAAACAGAACCAACGC    350

BSNT_00757___    351 AGCAACCGTTCAAGGCGCGACAACCGGTGTGGGCGGCGTGTTTACGCTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    351 AGCAACCGTTCAAGGCGCGACAACCGGTGTGGGCGGCGTGTTTACGCTGG    400

BSNT_00757___    401 CGGCAGACATTCCGGCAGTGCTTGGCTTATCACTAAAAACATTACAGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    401 CGGCAGACATTCCGGCAGTGCTTGGCTTATCACTAAAAACATTACAGGAT    450

BSNT_00757___    451 ATCGCAGTCGCATACGGCTATGACCCAAAGGAGAAAAAAGAACGCGTCTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU04390___yd    451 ATCGCAGTCGCATACGGCTATGACCCAAAGGAGAAAAAAGAACGAGTCTT    500

BSNT_00757___    501 CATTGTGAAATGCCTGCAGCTGACGTCGGCTGATGTTGTCGGCAAAAGAT    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU04390___yd    501 CATTGTGAAATGCCTGCAGCTTACGTCGGCTGATGTTGTCGGCAAAAGAT    550

BSNT_00757___    551 CGATTTTGCAGGAATTAAAACACTACGATCAAGACCGTACATATAAGAAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    551 CGATTTTGCAGGAATTAAAACACTACGATCAAGACCGTACATATAAGAAT    600

BSNT_00757___    601 GTCGCTTCTCAAATCCAAGGCTGGCGAGAAGTCGTTTTGGGCTATCGAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    601 GTCGCTTCTCAAATCCAAGGCTGGCGAGAAGTCGTTTTGGGCTATCGAGA    650

BSNT_00757___    651 CACGTTTGGCTGGAAAAAACTTTTCCAGATGGTGCCGGTTGCCGGAATGG    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04390___yd    651 CACGTTTGGCTGGAAAAAACTTTTCCAGATAGTGCCGGTTGCCGGAATGG    700

BSNT_00757___    701 TTTTTGGCGCCGCTGCCAATCGCTCAACATTAAACGACATTACCGAGACA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    701 TTTTTGGCGCCGCTGCCAATCGCTCAACATTAAACGACATTACCGAGACA    750

BSNT_00757___    751 GGCATGATGCTGTACAAAAAGAGGCGCATTCTTGAACGACTGAAAGAAAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04390___yd    751 GGCATGATGCTGTACAAAAAGAGGCGCATTCTTGAACGACTGAAAGAAAC    800

BSNT_00757___    801 AGAACGAGAGATGGAATAG    819
                     |||||||||||||||||||
BSU04390___yd    801 AGAACGAGAGATGGAATAG    819


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