Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00762 and BSU04420

See Amino acid alignment / Visit BSNT_00762 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:08
# Commandline: needle
#    -asequence dna-align/BSNT_00762___ydbC.1.22522.seq
#    -bsequence dna-align/BSU04420___ydbC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00762___ydbC-BSU04420___ydbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00762___ydbC-BSU04420___ydbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00762___ydbC
# 2: BSU04420___ydbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity:     355/360 (98.6%)
# Similarity:   355/360 (98.6%)
# Gaps:           0/360 ( 0.0%)
# Score: 1755.0
# 
#
#=======================================

BSNT_00762___      1 ATGCTAATCAAAAAGGTGATATGTGAAGTAGACGCTGCAAACGCTGAAGC     50
                     |||||||||||||||.||||||||||||||||.|||||||||||||||||
BSU04420___yd      1 ATGCTAATCAAAAAGATGATATGTGAAGTAGATGCTGCAAACGCTGAAGC     50

BSNT_00762___     51 ATTTGCAAAAGCGCAGTCACAGTGGGGAGCATTATCGCATATAAGCGGCT    100
                     ||||||||||||||||||||||||||.|||.|||||||||||||||||||
BSU04420___yd     51 ATTTGCAAAAGCGCAGTCACAGTGGGAAGCGTTATCGCATATAAGCGGCT    100

BSNT_00762___    101 TTATCAAACAGGCCGGCGGCTGGCGAAAAACGATAGACGAGCCGCTCACC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04420___yd    101 TTATCAAACAGGCCGGCGGCTGGCGAAAAACGATAGACGAGCCGCTCACC    150

BSNT_00762___    151 GCAGAAATCATCAGTGTATGGGAAAACAGAGAAGCCTATGATCATTTTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04420___yd    151 GCAGAAATCATCAGTGTATGGGAAAACAGAGAAGCCTATGATCATTTTAT    200

BSNT_00762___    201 GGAGAACGAACATGACAGCATATACGAGGAAAACGATCAGAAGGCAGTAA    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU04420___yd    201 GGAGAACGAACATGACAGCATATACGAGGAAAACGATCAGAAGGCTGTAA    250

BSNT_00762___    251 TTCTTTCGATAGAGGTGACGGTGTACGAAGAGGATAAACCGTTCGTTCAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04420___yd    251 TTCTTTCGATAGAGGTGACGGTGTACGAAGAGGATAAACCGTTCGTTCAC    300

BSNT_00762___    301 GATCTGTTACATAACCCCGATATCCGGTACGAACCAAACTGGACGGTTCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04420___yd    301 GATCTGTTACATAACCCCGATATCCGGTACGAACCAAACTGGACGGTTCT    350

BSNT_00762___    351 GAAGGCATAA    360
                     ||||||||||
BSU04420___yd    351 GAAGGCATAA    360


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