Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00763 and BSU04430

See Amino acid alignment / Visit BSNT_00763 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:08
# Commandline: needle
#    -asequence dna-align/BSNT_00763___ydbD.1.22522.seq
#    -bsequence dna-align/BSU04430___ydbD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00763___ydbD-BSU04430___ydbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00763___ydbD-BSU04430___ydbD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00763___ydbD
# 2: BSU04430___ydbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     810/822 (98.5%)
# Similarity:   810/822 (98.5%)
# Gaps:           0/822 ( 0.0%)
# Score: 4002.0
# 
#
#=======================================

BSNT_00763___      1 ATGTTTAAGCACACAAAAATGCTGCAGCATCCTGCTAAACCAGATCGTCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd      1 ATGTTTAAGCACACAAAAATGCTGCAGCATCCTGCTAAACCAGATCGTCC     50

BSNT_00763___     51 AGATCCATTATTCGCTAAAAAAATGCAAGAAATTTTAGGCGGGCAATTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd     51 AGATCCATTATTCGCTAAAAAAATGCAAGAAATTTTAGGCGGGCAATTCG    100

BSNT_00763___    101 GAGAAATTTCAGTTGCCATGCAGTACTTATTTCAAGGCTGGAACACAAGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    101 GAGAAATTTCAGTTGCCATGCAGTACTTATTTCAAGGCTGGAACACAAGA    150

BSNT_00763___    151 GGAAATGAAAAATACAAGGACTTGCTGATGGATACGGCAACCGAGGAGCT    200
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04430___yd    151 GGAAATGAAAAATACAAGGACTTGCTGATGGATACGGCAACTGAGGAGCT    200

BSNT_00763___    201 CGGGCATGTTGAAATGATTGCAACAATGATTGCCAGACTTCTTGAGGATG    250
                     ||||||||||||||||||.|||||.|||||||||||||||||||||||||
BSU04430___yd    201 CGGGCATGTTGAAATGATCGCAACGATGATTGCCAGACTTCTTGAGGATG    250

BSNT_00763___    251 CACCTCTTGATCAGCAGGAAAAAGCTGCTGAAGATCCGGTCATCGGCTCC    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    251 CCCCTCTTGATCAGCAGGAAAAAGCTGCTGAAGATCCGGTCATCGGCTCC    300

BSNT_00763___    301 ATCCTAGGCGGCATGAACCCTCACCATGCGATTGTATCAGGACTTGGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    301 ATCCTAGGCGGCATGAACCCTCACCATGCGATTGTATCAGGACTTGGCGC    350

BSNT_00763___    351 CATGCCTGAAAGCAGTACAGGCGTACCTTGGAGCGGCGGTTATATCGTAG    400
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    351 CATGCCGGAAAGCAGTACAGGCGTACCTTGGAGCGGCGGTTATATCGTAG    400

BSNT_00763___    401 CAAGCGGAAACCTGCTGGCAGACTTCCGCGCCAACCTGAATGCGGAATCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    401 CAAGCGGAAACCTGCTGGCAGACTTCCGCGCCAACCTGAATGCGGAATCT    450

BSNT_00763___    451 CAGGGCCGTCTGCAGGTCGCACGCCTGTTTGAAATGACGGATGACAAAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    451 CAGGGCCGTCTGCAGGTCGCACGCCTGTTTGAAATGACGGATGACAAAGG    500

BSNT_00763___    501 CGTCAAAGATATGCTCAGCTTCCTGCTGGCGCGTGACACGATGCACCAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04430___yd    501 CGTCAAAGATATGCTCAGCTTCCTGCTGGCGCGTGACACGATGCACCAGA    550

BSNT_00763___    551 ATCAATGGCTTGCCGCCATTAAAGAATTAGAAGCACAGGAAGGTCCGGTT    600
                     |.||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04430___yd    551 ACCAATGGCTCGCCGCCATTAAAGAATTAGAAGCACAGGAAGGTCCGGTT    600

BSNT_00763___    601 GTGCCGGGTACATTCCCGAAAGCGCTCGAAAAACAAGAGTTCTCACATCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    601 GTGCCGGGTACATTCCCGAAAGCGCTCGAAAAACAAGAGTTCTCACATCA    650

BSNT_00763___    651 GCTTATCAATTTCTCTGAAGGCGAAGAAAGCGCCCAGCAAAACTGGCTGA    700
                     ||||||||||||||||||||||||||.|||||||.|||||||||||||||
BSU04430___yd    651 GCTTATCAATTTCTCTGAAGGCGAAGTAAGCGCCGAGCAAAACTGGCTGA    700

BSNT_00763___    701 ATGAAAAAGCGCCGGACGGAGAAGCCTTTGAATATGTGAAAGAAGCAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04430___yd    701 ATGAAAAAGCGCCGGACGGAGAAGCCTTTGAATATGTGAAAGAAGCAAAA    750

BSNT_00763___    751 ACGTTTGGAGAAAAACCGGAGTTAAAACCAACACCGCCTTTTGTTCATAA    800
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04430___yd    751 ACGTTTGGAGAAAAACCGGAGTTAAAACCAGCACCGCCTTTTGTTCATAA    800

BSNT_00763___    801 TACACTTCCGGGACGCGAATAA    822
                     ||||||||||||||||||.|||
BSU04430___yd    801 TACACTTCCGGGACGCGAGTAA    822


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