Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00777 and BSU04520

See Amino acid alignment / Visit BSNT_00777 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:10
# Commandline: needle
#    -asequence dna-align/BSNT_00777___ydbM.1.22522.seq
#    -bsequence dna-align/BSU04520___ydbM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00777___ydbM-BSU04520___ydbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00777___ydbM-BSU04520___ydbM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00777___ydbM
# 2: BSU04520___ydbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1146
# Identity:    1133/1146 (98.9%)
# Similarity:  1133/1146 (98.9%)
# Gaps:           0/1146 ( 0.0%)
# Score: 5613.0
# 
#
#=======================================

BSNT_00777___      1 ATGTCATTATTTATACAAAACGATCAACAGCGGCAATGGATGGAGAAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd      1 ATGTCATTATTTATACAAAACGATCAACAGCGGCAATGGATGGAGAAAAT     50

BSNT_00777___     51 CGGACGGATTGCGGATGAATTTCAGCAAACTGCTGCTGAAGATGACGAAC    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04520___yd     51 CGGACGGATTGCGGATGAATTTCAGCAAACAGCTGCTGAAGATGACGAAC    100

BSNT_00777___    101 AGGGACGTTTTCCTGCAGAGAAAATACAAAAACTGCGTGATGCTGGGTAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    101 AGGGACGTTTTCCTGCAGAGAAAATACAAAAACTGCGTGATGCTGGGTAT    150

BSNT_00777___    151 ACAGCATTAACATTGCCGGCATCTCATGGCGGAGGGGGCATTTCTGTTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    151 ACAGCATTAACATTGCCGGCATCTCATGGCGGAGGGGGCATTTCTGTTTA    200

BSNT_00777___    201 CGATATGCTCCTGTTTCAAGAGCGGCTTGCACGGGGAGATGCTCCGACGG    250
                     ||||||||||.||||||||||.||||||||||||||||||||||||||||
BSU04520___yd    201 CGATATGCTCTTGTTTCAAGAACGGCTTGCACGGGGAGATGCTCCGACGG    250

BSNT_00777___    251 CTCTTAGCATCGGCTGGCATTTGAGCGTGATCGGGGAGCTTGGAGAAGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    251 CTCTTAGCATCGGCTGGCATTTGAGCGTGATCGGGGAGCTTGGAGAAGGC    300

BSNT_00777___    301 AACAGCTGGGATGAAGACGTATTTGCATTTGTTGCCAAGGAAGTCCAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    301 AACAGCTGGGATGAAGACGTATTTGCATTTGTTGCCAAGGAAGTCCAAAA    350

BSNT_00777___    351 CGGAGCCGTCATTAACAGGGCGGCGACTGAAGCGAAAACCGGAAGCCCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    351 CGGAGCCGTCATTAACAGGGCGGCGACTGAAGCGAAAACCGGAAGCCCGA    400

BSNT_00777___    401 CAAGAGGAGGGCGTCCCGGTACACACGCCGTCAAAAAGGATGGCAAATGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    401 CAAGAGGAGGGCGTCCCGGTACACACGCCGTCAAAAAGGATGGCAAATGG    450

BSNT_00777___    451 GCAGTGAACGGGAGAAAAACCTTTACGACGATGTCACAGGCTCTGGATTA    500
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU04520___yd    451 GCAGTGAACGGGAGAAAAACCTTTACGACGATGTCACAAGCTCTGGATTA    500

BSNT_00777___    501 TTTTTTAGTAACCGCATGGATTGAGGACAAACAAACAACAGGCGTGTTTC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    501 TTTTTTAGTAACCGCATGGATTGAGGACAAACAAACAACAGGCGTGTTTC    550

BSNT_00777___    551 TCATTCATAAAGATGATCCCGGCTTGTCGATTGAAGAAACGTGGGATATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    551 TCATTCATAAAGATGATCCCGGCTTGTCGATTGAAGAAACGTGGGATATG    600

BSNT_00777___    601 ATGGCGATGCGGGCGTCTGGGAGCCATGACCTTGTACTGAACGAAGTCAT    650
                     |||||||||||||||.|||||||||||||||||||||||||||||||.||
BSU04520___yd    601 ATGGCGATGCGGGCGACTGGGAGCCATGACCTTGTACTGAACGAAGTAAT    650

BSNT_00777___    651 GCTTGATGAGAATAAGCTGGTGGAACTGCTTCAAGGGCCTCGCGGAGCTA    700
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU04520___yd    651 GCTTGATGAGAATAAGCTGGTGGAACTGCTTCAAGGGCCTCGTGGAGCTA    700

BSNT_00777___    701 AGCCGAATGGCTGGCTGCTTCACATTCCGGCGATTTATCTTGGTGTGGCT    750
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04520___yd    701 AGCCGAATGGCTGGCTGCTTCACATTCCTGCGATTTATCTTGGTGTGGCT    750

BSNT_00777___    751 CAAGCTGCTCGTGACTATGCAGTGCAATTTGCATCTGAGTATTCTCCAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    751 CAAGCTGCTCGTGACTATGCAGTGCAATTTGCATCTGAGTATTCTCCAAA    800

BSNT_00777___    801 CAGCTTGAATGGACCGATCAAGAATGTCCCGGCCGTACAGCAAAGAACAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    801 CAGCTTGAATGGACCGATCAAGAATGTCCCGGCCGTACAGCAAAGAACAG    850

BSNT_00777___    851 GCGAAATGGAGCTTGAACTGCTCAATGCCAGACACTTTCTTTTCCATATC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd    851 GCGAAATGGAGCTTGAACTGCTCAATGCCAGACACTTTCTTTTCCATATC    900

BSNT_00777___    901 GCTCAATTGTATGACGATCCGGAGCGGCGTCCACACTTGACAAGCGAGCT    950
                     ||||||||||||||||||||||.||||||||||||||||||.||||||||
BSU04520___yd    901 GCTCAATTGTATGACGATCCGGTGCGGCGTCCACACTTGACCAGCGAGCT    950

BSNT_00777___    951 CGGTGCGGCTAAGCATATCGTCACAAACGCTGCGCTGTCTGTTGTTGATA   1000
                     |||||||||.||.|||||||||||||||||||||||||||||||||||||
BSU04520___yd    951 CGGTGCGGCGAAACATATCGTCACAAACGCTGCGCTGTCTGTTGTTGATA   1000

BSNT_00777___   1001 AAGCGATGAGAATTGTCGGGGCCAAAAGCCTGGAACGAACCAACCCGCTT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd   1001 AAGCGATGAGAATTGTCGGGGCCAAAAGCCTGGAACGAACCAACCCGCTT   1050

BSNT_00777___   1051 CAGCGCTATTACCGTGATGTGCGCGCCGGTCTTCACAACCCGCCGATGGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04520___yd   1051 CAGCGCTATTACCGTGATGTGCGCGCCGGTCTTCACAACCCGCCGATGGA   1100

BSNT_00777___   1101 TGACGCCGTGATACACAAGCTGGCGGCTGAAGCGTTTGAGTCATAA   1146
                     ||||||||||||||||||||||||.|||||||||||||||||||||
BSU04520___yd   1101 TGACGCCGTGATACACAAGCTGGCAGCTGAAGCGTTTGAGTCATAA   1146


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