Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00793 and BSU04630

See Amino acid alignment / Visit BSNT_00793 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:12
# Commandline: needle
#    -asequence dna-align/BSNT_00793___ydcC.1.22522.seq
#    -bsequence dna-align/BSU04630___ydcC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00793___ydcC-BSU04630___ydcC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00793___ydcC-BSU04630___ydcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00793___ydcC
# 2: BSU04630___ydcC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1122
# Identity:    1014/1122 (90.4%)
# Similarity:  1014/1122 (90.4%)
# Gaps:         105/1122 ( 9.4%)
# Score: 5058.0
# 
#
#=======================================

BSNT_00793___      1 TTGAGGCTTTTATGGTACGCATCTGTTCTGCCTAAACGTGTACCGAGCGT     50
                                                                       
BSU04630___yd      0 --------------------------------------------------      0

BSNT_00793___     51 ACCGTTAAAGTCAAACAAGCGATTTCTTCCTTTTACATCAATTGAGAAAA    100
                                                                       
BSU04630___yd      0 --------------------------------------------------      0

BSNT_00793___    101 AGGGGTTGAAAAAGGTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGACTG    150
                          |||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd      1 -----TTGAAAAAGGTGAGAAAAAGCTTTGTTTTGCTTTTAACGGGACTG     45

BSNT_00793___    151 CTTGCTGTTCTTATTCTTTCTGCCTGCGGGCAAAAAACACAGCAAGATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd     46 CTTGCTGTTCTTATTCTTTCTGCCTGCGGGCAAAAAACACAGCAAGATAT     95

BSNT_00793___    201 TGTGGCCGGGTTAGATGAAAAGGCGAAAGAATACACCTCGTACAAAGCAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd     96 TGTGGCCGGGTTAGATGAAAAGGCGAAAGAATACACCTCGTACAAAGCAA    145

BSNT_00793___    251 AAGCGAAAATGACCATCGAGACAGGGAGTGAGCCTCAAGTATACAATGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    146 AAGCGAAAATGACCATCGAGACAGGGAGTGAGCCTCAAGTATACAATGTG    195

BSNT_00793___    301 GAAATCTGGCACAAAAAGCCGTCTCTGTACAGGGTTTATTTAGAAAATCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    196 GAAATCTGGCACAAAAAGCCGTCTCTGTACAGGGTTTATTTAGAAAATCC    245

BSNT_00793___    351 GAAAAAGGACCAAAACCAAGTCATTTTACGAAATGAAAACGGAGTATTCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    246 GAAAAAGGACCAAAACCAAGTCATTTTACGAAATGAAAACGGAGTATTCG    295

BSNT_00793___    401 TTCTCACGCCGTCTTTAAATAAGAGCTTCAGATTTCAAAGCGATTGGCCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    296 TTCTCACGCCGTCTTTAAATAAGAGCTTCAGATTTCAAAGCGATTGGCCG    345

BSNT_00793___    451 AACAACAGCAGCCAGGTTTATCTGTTTGAATCGCTCGTAAAGGATGTTCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    346 AACAACAGCAGCCAGGTTTATCTGTTTGAATCGCTCGTAAAGGATGTTCA    395

BSNT_00793___    501 AAACGATTCGGATGCAGTTTTCACAGCGAAAGAAAAGAAATACGTATTCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU04630___yd    396 AAACGATTCGGATGCAGTTTTCACAGCGAAAGAAAAGAAATACGTATTTG    445

BSNT_00793___    551 AAACAAAAACAAACTATCAGCATAACAAAATGCTGCCCACGCAAGAAATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    446 AAACAAAAACAAACTATCAGCATAACAAAATGCTGCCCACGCAAGAAATC    495

BSNT_00793___    601 ACATTTAACAAAAAAGATATGAGCCCGTCATCTGTCAAAGTGATGGATAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    496 ACATTTAACAAAAAAGATATGAGCCCGTCATCTGTCAAAGTGATGGATAC    545

BSNT_00793___    651 TGACCGCAAAGTGATGGTCAAAGTAGAATTCAGCAGCTTTGAATTTAATA    700
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    546 TGACCGGAAAGTGATGGTCAAAGTAGAATTCAGCAGCTTTGAATTTAATA    595

BSNT_00793___    701 AACAATTTGATAAAGAATCATTTGATGAAAAGAAAAATATGACCCTTTCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    596 AACAATTTGATAAAGAATCATTTGATGAAAAGAAAAATATGACCCTTTCT    645

BSNT_00793___    751 CAAATGGATGTCGCCACAAGCGCGAAGCCTTCCGATACATTTGCGGTCAA    800
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU04630___yd    646 CAAATGGATGTCGCCACAAGCGCAAAGCCTTCCGATACATTTGCGGTCAA    695

BSNT_00793___    801 AACGCCGCTGGAACTGCCGCTTGGCGTCAAGCTGCTTGAAGAAAAAGATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    696 AACGCCGCTGGAACTGCCGCTTGGCGTCAAGCTGCTTGAAGAAAAAGATA    745

BSNT_00793___    851 TATCTACTGAAGACGGGAAGCGCATCATCATGACGTACGGAGGAGAAAAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    746 TATCTACTGAAGACGGGAAGCGCATCATCATGACGTACGGAGGAGAAAAA    795

BSNT_00793___    901 TCATTTACGTTAATTCAGGAAAAAGCCCAGATTGCCAAGGCTTCCTCCTC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    796 TCATTTACGTTAATTCAGGAAAAAGCCCAGATTGCCAAGGCTTCCTCCTC    845

BSNT_00793___    951 CGTTACGCTGAACGGCGAACCGGTAAATCTCGGCTACACCATCGGCGCCC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    846 CGTTACGCTGAACGGCGAACCGGTAAATCTCGGCTACACCATCGGCGCCC    895

BSNT_00793___   1001 TGTCGGATGCATCATTATCATGGACATATGACGGCGTAGATTACCTTCTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    896 TGTCGGATGCATCATTATCATGGACATATGACGGCGTAGATTACCTTCTC    945

BSNT_00793___   1051 TCTTCTAAAGATCTTTCTAAAGAGGAAATGGTGACAGTAGCGAAAAGCAT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04630___yd    946 TCTTCTAAAGATCTTTCTAAAGAGGAAATGGTGACAGTAGCGAAAAGCAT    995

BSNT_00793___   1101 GCAGGGACAATCATCGAAATAA   1122
                     ||||||||||||||||||||||
BSU04630___yd    996 GCAGGGACAATCATCGAAATAA   1017


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