Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00797 and BSU04660

See Amino acid alignment / Visit BSNT_00797 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence dna-align/BSNT_00797___ydcE.1.22522.seq
#    -bsequence dna-align/BSU04660___ndoA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00797___ydcE-BSU04660___ndoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00797___ydcE-BSU04660___ndoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00797___ydcE
# 2: BSU04660___ndoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity:     350/351 (99.7%)
# Similarity:   350/351 (99.7%)
# Gaps:           0/351 ( 0.0%)
# Score: 1746.0
# 
#
#=======================================

BSNT_00797___      1 TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04660___nd      1 TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGT     50

BSNT_00797___     51 TGGCTCAGAGCAAGGCGGGGTGCGCCCGGTCTTAGTGATCCAAAATGACA    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU04660___nd     51 TGGCTCAGAGCAAGGCGGGGTGCGCCCGGTTTTAGTGATCCAAAATGACA    100

BSNT_00797___    101 TCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04660___nd    101 TCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAA    150

BSNT_00797___    151 ATACAGAAAGCGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04660___nd    151 ATACAGAAAGCGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTA    200

BSNT_00797___    201 CGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATTCGGACGATTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04660___nd    201 CGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATTCGGACGATTG    250

BSNT_00797___    251 ACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04660___nd    251 ACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATG    300

BSNT_00797___    301 GATAAGGTTGATGAAGCCTTACAAATCAGTTTGGCACTCATTGATTTTTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04660___nd    301 GATAAGGTTGATGAAGCCTTACAAATCAGTTTGGCACTCATTGATTTTTA    350

BSNT_00797___    351 G    351
                     |
BSU04660___nd    351 G    351


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.