Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00800 and BSU04690

See Amino acid alignment / Visit BSNT_00800 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:13
# Commandline: needle
#    -asequence dna-align/BSNT_00800___rsbT.1.22522.seq
#    -bsequence dna-align/BSU04690___rsbT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00800___rsbT-BSU04690___rsbT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00800___rsbT-BSU04690___rsbT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00800___rsbT
# 2: BSU04690___rsbT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity:     400/402 (99.5%)
# Similarity:   400/402 (99.5%)
# Gaps:           0/402 ( 0.0%)
# Score: 1992.0
# 
#
#=======================================

BSNT_00800___      1 ATGAACGACCAATCCTGTGTAAAAATCATGACAGAATGGGATATTGTGGC     50
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU04690___rs      1 ATGAACGACCAATCCTGTGTAAGAATCATGACAGAATGGGATATTGTGGC     50

BSNT_00800___     51 CGCCAGACAGCTGGGACGAAACGTTGCGAAAGAACTGGGTTTCGGCACGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs     51 CGCCAGACAGCTGGGACGAAACGTTGCGAAAGAACTGGGTTTCGGCACGG    100

BSNT_00800___    101 TAGACCAGGCTAGAATTACAACGGCTATTTCAGAATTAGCCAGGAATATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs    101 TAGACCAGGCTAGAATTACAACGGCTATTTCAGAATTAGCCAGGAATATT    150

BSNT_00800___    151 TATTTATATGCCGGCAAAGGGCAGATTGGAATTGAACAGGTCGCAGACAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs    151 TATTTATATGCCGGCAAAGGGCAGATTGGAATTGAACAGGTCGCAGACAG    200

BSNT_00800___    201 AGGAAAAAAAGGCCTGAAAATCATAGCGGAAGACCAAGGGCCGGGAATTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs    201 AGGAAAAAAAGGCCTGAAAATCATAGCGGAAGACCAAGGGCCGGGAATTC    250

BSNT_00800___    251 CTGATATCCGAAAAGTCATGGAAGACGGGTTTTCAACGTCTGGAGGACTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs    251 CTGATATCCGAAAAGTCATGGAAGACGGGTTTTCAACGTCTGGAGGACTT    300

BSNT_00800___    301 GGTGCGGGACTTCCCGGGGTCAAAAGGCTGATGGATGAATTCAGCTTAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs    301 GGTGCGGGACTTCCCGGGGTCAAAAGGCTGATGGATGAATTCAGCTTAAA    350

BSNT_00800___    351 TTCCGTAACGGGGGAAGGAACAGAGATACAAGCCATCAAATGGCTTCGGT    400
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04690___rs    351 TTCCGTAGCGGGGGAAGGAACAGAGATACAAGCCATCAAATGGCTTCGGT    400

BSNT_00800___    401 AG    402
                     ||
BSU04690___rs    401 AG    402


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