Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00808 and BSU04760

See Amino acid alignment / Visit BSNT_00808 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:14
# Commandline: needle
#    -asequence dna-align/BSNT_00808___ydcG.1.22522.seq
#    -bsequence dna-align/BSU04760___ydcG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00808___ydcG-BSU04760___ydcG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00808___ydcG-BSU04760___ydcG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00808___ydcG
# 2: BSU04760___ydcG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     438/441 (99.3%)
# Similarity:   438/441 (99.3%)
# Gaps:           0/441 ( 0.0%)
# Score: 2178.0
# 
#
#=======================================

BSNT_00808___      1 ATGAACACAAATTACTGGATCGGCGTTGTGTCAGAGCAGCATGTATTAAA     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU04760___yd      1 ATGAACACAAATTACTGGATCGGCGTTGTGTCAGAGCAACATGTATTAAA     50

BSNT_00808___     51 AGGCGCTGCCGGCGGTTTTGCACAGCTGTGCCATGGAAAAAAAGCCCCGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04760___yd     51 AGGCGCTGCCGGCGGTTTTGCACAGCTGTGCCATGGAAAAAAAGCCCCGC    100

BSNT_00808___    101 TCGCCAAAATGAAAGAGGGAGATTGGCTGATTTATTATTCTCCGAGAGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04760___yd    101 TCGCCAAAATGAAAGAGGGAGATTGGCTGATTTATTATTCTCCGAGAGAC    150

BSNT_00808___    151 GCATATCCAGACGGCAAACTGCTGCGAAGCTTTACTGCGATCGGCAAAGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04760___yd    151 GCATATCCAGACGGCAAACTGCTGCGAAGCTTTACTGCGATCGGCAAAGT    200

BSNT_00808___    201 AAAAAGCGGAAACATCTATCCGTATCAAATGGCTCCGAATTTTATTCCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04760___yd    201 AAAAAGCGGAAACATCTATCCGTATCAAATGGCTCCGAATTTTATTCCAT    250

BSNT_00808___    251 ACCGATTAGATATAGACTATTATCCATGCCATAAAATCGGTTTTTACGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04760___yd    251 ACCGATTAGATATAGACTATTATCCATGCCATAAAATCGGTTTTTACGAC    300

BSNT_00808___    301 ATTAAATCAAAGCTTGAATTTGTTCAGGAAACCAAGCATCTTGGCTTTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04760___yd    301 ATTAAATCAAAGCTTGAATTTGTTCAGGAAACCAAGCATCTTGGCTTTTT    350

BSNT_00808___    351 ATTTCGCAGTGGACACTTTGAAGTAAGCAAAAAAGATTTTTTGACAATAG    400
                     |||||||||.||||||||||||.|||||||||||||||||||||||||||
BSU04760___yd    351 ATTTCGCAGAGGACACTTTGAAATAAGCAAAAAAGATTTTTTGACAATAG    400

BSNT_00808___    401 CACAAGCGATGGGAGTTAACATAAGTGGAATGGCACTCTAA    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU04760___yd    401 CACAAGCGATGGGAGTTAACATAAGTGGAATGGCACTCTAA    441


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