Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00811 and BSU04780

See Amino acid alignment / Visit BSNT_00811 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:14
# Commandline: needle
#    -asequence dna-align/BSNT_00811___ydcI.1.22522.seq
#    -bsequence dna-align/BSU04780___ydcI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00811___ydcI-BSU04780___ydcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00811___ydcI-BSU04780___ydcI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00811___ydcI
# 2: BSU04780___ydcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2160
# Identity:    2130/2160 (98.6%)
# Similarity:  2130/2160 (98.6%)
# Gaps:           0/2160 ( 0.0%)
# Score: 10530.0
# 
#
#=======================================

BSNT_00811___      1 ATGGAAACGTCAGCCCTTTTAAAACAGCAAATTGCGAAAGAAATAGGTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd      1 ATGGAAACGTCAGCCCTTTTAAAACAGCAAATTGCGAAAGAAATAGGTTT     50

BSNT_00811___     51 ATCACAAAAACACGTTGAAAGTGTCATCCGCCTGCTAGAAGACGGCAATA    100
                     ||||||||||||||||||||||||||||||||||||.||.||||||||||
BSU04780___yd     51 ATCACAAAAACACGTTGAAAGTGTCATCCGCCTGCTTGAGGACGGCAATA    100

BSNT_00811___    101 CAGTACCGTTTATTGCCCGGTATCGAAAAGAGCAGACGGGTTCAATGGAT    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    101 CAGTCCCGTTTATTGCCCGGTATCGAAAAGAGCAGACGGGTTCAATGGAT    150

BSNT_00811___    151 GAGGTTCAGATTCAGACGATTTCTGAACGCTGGCAATACATACAAAACCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    151 GAGGTTCAGATTCAGACGATTTCTGAACGCTGGCAATACATACAAAACCT    200

BSNT_00811___    201 GAACCAGCGAAAAGAAGAAGTCATCAGGCTGATTGCAGAGCAGGATAAAC    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    201 GAATCAGCGAAAAGAAGAAGTCATCAGGCTGATTGCAGAGCAGGATAAAC    250

BSNT_00811___    251 TGACAGATGATCTAAAAGGTAAAATCGAGCAATCGGTGAAGCTTCAGGAA    300
                     ||||||||.||||||||.||||||||||||||||||||||||||||||||
BSU04780___yd    251 TGACAGATAATCTAAAACGTAAAATCGAGCAATCGGTGAAGCTTCAGGAA    300

BSNT_00811___    301 GTGGAAGACCTTTACCGCCCTTATAAACAAAAACGCAAAACAAAGGCGAC    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU04780___yd    301 GTGGAAGACCTTTACCGCCCTTATAAACAAAAACGTAAAACAAAGGCGAC    350

BSNT_00811___    351 AGTCGCCAAAAGCAAAGGCCTTGAGCCGCTTGCCGACTATATCCTGACAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    351 AGTCGCCAAAAGCAAAGGCCTTGAGCCGCTTGCCGACTATATCCTGACAC    400

BSNT_00811___    401 TTCCCCAAGATGATCGTCTGGCAGCAACTGCAGACCAATACATCAGCGAA    450
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04780___yd    401 TTCCCCAAGATGATCATCTGGCAGCAACTGCAGACCAATACATCAGCGAA    450

BSNT_00811___    451 GAAAAAGAAGTGTTCACACGAGAAGAAGCGATTGAAGGCGCCAAGCACAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    451 GAAAAAGAAGTGTTCACACGAGAAGAAGCGATTGAAGGCGCCAAGCACAT    500

BSNT_00811___    501 TATTGCGGAACAAATCTCAGACGAGCCGACCTTCAGAAAGTGGATTCGCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    501 TATTGCGGAACAAATCTCAGACGAGCCGACCTTCAGAAAGTGGATTCGCC    550

BSNT_00811___    551 AGGAAACCTTCAAAAGAGGAACCATTAAGTCCGCAGCCGGAAAGTCGGCA    600
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU04780___yd    551 AGGAAACCTTCAAAAGAGGAACCATTAAGTCTGCAGCCGGAAAGTCGGCA    600

BSNT_00811___    601 GACACCGATGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    601 GACACCGATGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCC    650

BSNT_00811___    651 AATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    651 AATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAA    700

BSNT_00811___    701 AAGAAGATATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAG    750
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    701 AAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAG    750

BSNT_00811___    751 GCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    751 GCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGA    800

BSNT_00811___    801 GATTTTGCAGGAGACAATTGAAGACAGCTATAAAAGGCTGATCCAGCCGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    801 GATTTTGCAGGAGACAATTGAAGACAGCTATAAAAGGCTGATCCAGCCGG    850

BSNT_00811___    851 CAATCGAGCGTGAAATCAGGAAAGAGCTCTCAGAAAAAGCTGATGAACAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    851 CAATCGAGCGTGAAATCAGGAAAGAGCTCTCAGAAAAAGCTGATGAACAG    900

BSNT_00811___    901 GCGATTCATATTTTCTCAGAGAACTTGAGAAAGCTTCTTTTGCAGCCGCC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd    901 GCGATTCATATTTTCTCAGAGAACTTGAGAAAGCTTCTTTTGCAGCCGCC    950

BSNT_00811___    951 GATGAAAGGCAAAACCGTTCTCGGTGTTGACCCAGCCTTTCGAACCGGCT   1000
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU04780___yd    951 GATGAAAGGCAAAACCGTTCTCGGTGTTGACCCAGCCTTTCGAACTGGCT   1000

BSNT_00811___   1001 GTAAGCTCGCTGTGTCAGATGAGACTGGAAAAGTCTTGAAAATTGATGTG   1050
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04780___yd   1001 GTAAGCTCGCTGTGTCAGATGAGACCGGAAAAGTCTTGAAAATTGATGTG   1050

BSNT_00811___   1051 ATCTATCCGCATGCGCCAGTCAACAAAACAAAAGAAGCCCATGAAAAAGT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1051 ATCTATCCGCATGCGCCAGTCAACAAAACAAAAGAAGCCCATGAAAAAGT   1100

BSNT_00811___   1101 GAAAAAGATTCTTGAGCAGTATCAAGTCGAGATGGTGGCGATCGGAAACG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1101 GAAAAAGATTCTTGAGCAGTATCAAGTCGAGATGGTGGCGATCGGAAACG   1150

BSNT_00811___   1151 GCACAGCATCCAGAGAAACAGAACAATTCATCGTCAATGTACTGAAAGAC   1200
                     ||||||||||||||||||||||.||||||||||||||||||||.|.||||
BSU04780___yd   1151 GCACAGCATCCAGAGAAACAGAGCAATTCATCGTCAATGTACTCAGAGAC   1200

BSNT_00811___   1201 ATGCCGCGCAAAATTTATTATGTGATCGTCAATGAAGCGGGTGCAAGCGT   1250
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU04780___yd   1201 ATGCCGCGCAAAATTTATTATGTGATCGTCAATGAAGCGGGAGCAAGCGT   1250

BSNT_00811___   1251 CTATTCGGCTTCAGAGCTGGCCCGAGAAGAATTCCCTGACCTTAAGGTTG   1300
                     ||||||||||||||||||.|||.|||||||||||||||||||||||||||
BSU04780___yd   1251 CTATTCGGCTTCAGAGCTTGCCAGAGAAGAATTCCCTGACCTTAAGGTTG   1300

BSNT_00811___   1301 AAGAGCGCAGTGCCGTGTCTATTGCGCGAAGACTTCAAGACCCGCTTGCG   1350
                     ||||||||||||||||.||||||||.||.|||||||||||||||||.|||
BSU04780___yd   1301 AAGAGCGCAGTGCCGTATCTATTGCTCGGAGACTTCAAGACCCGCTCGCG   1350

BSNT_00811___   1351 GAGCTCGTTAAAATCGATCCGAAGTCTGTTGGTGTCGGACAGTATCAGCA   1400
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1351 GAGCTCGTTAAGATCGATCCGAAGTCTGTTGGTGTCGGACAGTATCAGCA   1400

BSNT_00811___   1401 TGACGTCAGCCAAAAACGCTTAAATGAATCTCTGCGGTTTGTCGTCGAAA   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1401 TGACGTCAGCCAAAAACGCTTAAATGAATCTCTGCGGTTTGTCGTCGAAA   1450

BSNT_00811___   1451 CGGTCGTAAACCAGGTGGGAGTAAACGTCAACACAGCCTCCGCCGCGCTG   1500
                     |.||||||||||||||.|||||||||||||||||||||||||||||||||
BSU04780___yd   1451 CTGTCGTAAACCAGGTTGGAGTAAACGTCAACACAGCCTCCGCCGCGCTG   1500

BSNT_00811___   1501 CTTCAGTATGTAGCGGGATTATCGAAGTCTGTAGCAGGCAACGTTGTCAA   1550
                     |||||.||||||||.|||||||||||||||||||||||||||||||||||
BSU04780___yd   1501 CTTCAATATGTAGCTGGATTATCGAAGTCTGTAGCAGGCAACGTTGTCAA   1550

BSNT_00811___   1551 AAAACGTGAGGAAATCGGAAAGTTTTCAAATCGAAAAGAACTGAAGGACA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1551 AAAACGTGAGGAAATCGGAAAGTTTTCAAATCGAAAAGAACTGAAGGACA   1600

BSNT_00811___   1601 TCCCAAGGTTAGGTGCGAAAACCTACGAGCAATGTATCGGTTTCTTAAGA   1650
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU04780___yd   1601 TCCCAAGGTTAGGTGCGAAAACCTATGAGCAATGTATCGGTTTCTTAAGA   1650

BSNT_00811___   1651 GTGCAGGAAGGGACAGAGCCTTTGGATAGAACAGGCATCCACCCGGAAAG   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1651 GTGCAGGAAGGGACAGAGCCTTTGGATAGAACAGGCATCCACCCGGAAAG   1700

BSNT_00811___   1701 CTATAAAGAAACAAAAGCACTTTTGAAAAAACTCGGACTTTCAACAGAAC   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1701 CTATAAAGAAACAAAAGCACTTTTGAAAAAACTCGGACTTTCAACAGAAC   1750

BSNT_00811___   1751 ATATCGGCACGGCGGAATTGAAGGACAAAATCAATCAGCTGGCGCTCTCT   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1751 ATATCGGCACGGCGGAATTGAAGGACAAAATCAATCAGCTGGCGCTCTCT   1800

BSNT_00811___   1801 GAAACGGCAAAAGAGCTGGGAATCGGCGAAATCACTCTGAAAGACATTTG   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1801 GAAACGGCAAAAGAGCTGGGAATCGGCGAAATCACTCTGAAAGACATTTG   1850

BSNT_00811___   1851 TGAACAGCTGACAAGGCCGGAACGCGATCCGCGCGATGAGGTGCCTAAGC   1900
                     ||||||||||||||||||||||||||||||.||||||.||||||||||||
BSU04780___yd   1851 TGAACAGCTGACAAGGCCGGAACGCGATCCACGCGATAAGGTGCCTAAGC   1900

BSNT_00811___   1901 CTTTGCTGAAAACAGACGTCCTTCAGCTGGAAGATTTGAAAGAGGGAATG   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1901 CTTTGCTGAAAACAGACGTCCTTCAGCTGGAAGATTTGAAAGAGGGAATG   1950

BSNT_00811___   1951 GAACTGCAGGGCACCGTGCGCAATGTAGTGGACTTCGGAGCGTTTGTTGA   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   1951 GAACTGCAGGGCACCGTGCGCAATGTAGTGGACTTCGGAGCGTTTGTTGA   2000

BSNT_00811___   2001 TATCGGAGTCAAACAAGACGGGCTTGTGCATATCTCAAAATTGAGCAATC   2050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   2001 TATCGGAGTCAAACAAGACGGGCTTGTGCATATCTCAAAATTGAGCAATC   2050

BSNT_00811___   2051 AATTCGTCAAGCATCCTCTTGATGTCGTATCTGTCGGCGATATTGTGACA   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   2051 AATTCGTCAAGCATCCTCTTGATGTCGTATCTGTCGGCGATATTGTGACA   2100

BSNT_00811___   2101 GTTTGGGTTGACGGCGTAGATGTACAAAAAGGCAGAGTATCGCTGTCTAT   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04780___yd   2101 GTTTGGGTTGACGGCGTAGATGTACAAAAAGGCAGAGTATCGCTGTCTAT   2150

BSNT_00811___   2151 GGTAAAATAA   2160
                     ||||||||||
BSU04780___yd   2151 GGTAAAATAA   2160


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