Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00855 and BSU04960
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Amino acid alignment /
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:17
# Commandline: needle
# -asequence dna-align/BSNT_00855.1.22522.seq
# -bsequence dna-align/BSU04960___yddG.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00855-BSU04960___yddG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00855-BSU04960___yddG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00855
# 2: BSU04960___yddG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2451
# Identity: 2281/2451 (93.1%)
# Similarity: 2281/2451 (93.1%)
# Gaps: 12/2451 ( 0.5%)
# Score: 10775.0
#
#
#=======================================
BSNT_00855 1 ---------ATGAAGAAAAAAAGAATTCTAATTGTGTCGGCTATCGTGTT 41
|||||.||.|||||||||.|.||||||||||||||.|||||
BSU04960___yd 1 GTGGTTGTAATGAAAAAGAAAAGAATTTTGATTGTGTCGGCTATTGTGTT 50
BSNT_00855 42 GCTGTTTTTAACTGTCGCTTCAGCTGTAACAGTATTTTCGGCTGATGGAG 91
|||||||||||||||.||||||||||||||.|||||||||||||||||||
BSU04960___yd 51 GCTGTTTTTAACTGTTGCTTCAGCTGTAACGGTATTTTCGGCTGATGGAG 100
BSNT_00855 92 ATACNACGACACAGCCAAAAGTCGAAAAAGCTGGCGGCGTGGAATTGAAG 141
|||| |||||.|||||||||||||||||||||||||||||||||||||||
BSU04960___yd 101 ATACAACGACGCAGCCAAAAGTCGAAAAAGCTGGCGGCGTGGAATTGAAG 150
BSNT_00855 142 GTGAAAAGGTTTCCTATCTCACGTTATCAAGCGAATAATGAAGCATCTGA 191
||||||||||||||.||||||||.||||||||||||||||||||||||||
BSU04960___yd 151 GTGAAAAGGTTTCCAATCTCACGCTATCAAGCGAATAATGAAGCATCTGA 200
BSNT_00855 192 CGATTTAATCAAGGGGGCGTTTGTTGGACTGACAAACGTCACTTTTTCTT 241
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU04960___yd 201 CGATTTAATCAAGGGGGCGTTTGTTGGGCTGACAAACGTCACTTTTTCTT 250
BSNT_00855 242 TTGCAGGAAACATTGTCCGTGTGGTTGATGCGGGAATGGATATTTTGTAT 291
||||.||||||||||||||||||||||||.||||.|||||||||||||||
BSU04960___yd 251 TTGCGGGAAACATTGTCCGTGTGGTTGATACGGGGATGGATATTTTGTAT 300
BSNT_00855 292 AACTTGCAACCAATTGACGAGTTTGCAAATTCTATTACAAATGTCTCTAA 341
|||||||||||.|||||||||||.|||||||||||||||||.||||||||
BSU04960___yd 301 AACTTGCAACCGATTGACGAGTTCGCAAATTCTATTACAAACGTCTCTAA 350
BSNT_00855 342 AACAGTTTATAAAACACTGAAAAAGAATTTCGGTGAAGCTTTATTTATTT 391
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 351 AACAGTTTATAAAACACTGAAAAAGAATTTCGGTGAAGCTTTATTTATTT 400
BSNT_00855 392 TCACATGTGCCTATGTTGTCTACCTGTTCTGTGTAAGAGGTAGCATAAAA 441
||||.||.|||||||||||||||||.||||||||.|||||||||.|||||
BSU04960___yd 401 TCACGTGCGCCTATGTTGTCTACCTATTCTGTGTGAGAGGTAGCGTAAAA 450
BSNT_00855 442 GAAGCAATGCGACGGAGTATTCTATTTATTTGTGTCATGGTGATCGGTGG 491
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU04960___yd 451 GAAGCAATGCGGCGGAGTATTCTATTTATTTGTGTCATGGTGATCGGTGG 500
BSNT_00855 492 GCTTTGGATGTCAAACGCTGGTTATTACATGAAAGCGTTGAATGCCTTGT 541
||||||||||||.||||||||||||||||||||||..|||||||||||||
BSU04960___yd 501 GCTTTGGATGTCGAACGCTGGTTATTACATGAAAGTATTGAATGCCTTGT 550
BSNT_00855 542 CTGTAGAAGCGCAAGGAAAGCTTTTAACTGCGGGAAATGGATTGGTTGGT 591
||||||||||.|||||||||||||||||||||||.||||||||||||||.
BSU04960___yd 551 CTGTAGAAGCTCAAGGAAAGCTTTTAACTGCGGGGAATGGATTGGTTGGC 600
BSNT_00855 592 ATTGTGCGTGATGAAGGCAATTTTGCAGACAGTTCTGGGATTGAAAAAGG 641
|||||.|..||||||||||||||||||||||||||.|.||||||||||||
BSU04960___yd 601 ATTGTTCAAGATGAAGGCAATTTTGCAGACAGTTCAGCGATTGAAAAAGG 650
BSNT_00855 642 AAAAGAAATGGAAGGCACAGTTGCGGTTATGCGTAATCTTTACTTTGACA 691
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 651 AAAAGAAATGGAAGGCACAGTTGCGGTTATGCGTAATCTTTACTTTGACA 700
BSNT_00855 692 TTGCTTTGATGAAGCCTTTTTTAATTGTGAATTTTGATGAAACAAGCGAA 741
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 701 TTGCTTTGATGAAGCCTTTTTTAATTGTGAATTTTGATGAAACAAGCGAA 750
BSNT_00855 742 AAGAAAATCAATGAGAAAGATACAGATAAAGGCGGACTTAATCGTATAGA 791
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU04960___yd 751 AAGAAAATCAATGAGGAAGATACAGATAAAGGCGGACTTAATCGTATAGA 800
BSNT_00855 792 TAAACTGCTTTCTTATAAGCTTTCAGAGGATGGAGAAAAAGATAAAAAAG 841
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 801 TAAACTGCTTTCTTATAAGCTTTCAGAGGATGGAGAAAAAGATAAAAAAG 850
BSNT_00855 842 ATTATATAAAAGAAACTGAAATTGATGAATATAAAAATGAATCTATGACT 891
|||||||||||||.||||||||||||||.|||||||||||||||||||||
BSU04960___yd 851 ATTATATAAAAGAGACTGAAATTGATGATTATAAAAATGAATCTATGACT 900
BSNT_00855 892 TCTGGAAATGTGTTTAATCAGCTTGGAGAATCTTTTATTGCTGTGGTCGC 941
|||||||||||||||||||||||.|||||.||||||||.|||||||||||
BSU04960___yd 901 TCTGGAAATGTGTTTAATCAGCTGGGAGAGTCTTTTATCGCTGTGGTCGC 950
BSNT_00855 942 TTCTATTGTTATTGGAATCCCATTTTTGGCACTAGCGTTTTTTAATTTCT 991
|||||||||.|||||.||.||||||||.|||.|||||||.||||||||||
BSU04960___yd 951 TTCTATTGTCATTGGGATACCATTTTTAGCATTAGCGTTCTTTAATTTCT 1000
BSNT_00855 992 TGCTTCAAGTTGTTGCTTTAGTCATTGTCTTTTTCGTACCATTCGCTTTC 1041
|||||||||||||.||||||||.||.||.||.||.||.|||||.||||||
BSU04960___yd 1001 TGCTTCAAGTTGTCGCTTTAGTGATAGTTTTCTTTGTGCCATTTGCTTTC 1050
BSNT_00855 1042 ATATTAGCGTATGTTCCCCAATTAGCTTACTCTGGATTTGTCACTCTTGG 1091
||.||||||||||||||.|||||||||||.||.||||||||.||.|||||
BSU04960___yd 1051 ATCTTAGCGTATGTTCCTCAATTAGCTTATTCGGGATTTGTTACGCTTGG 1100
BSNT_00855 1092 ACGTTTGGGGAGTGTTTATCTACTGAAAGCAATGTTAGGTATTATTGTTC 1141
|||.||||||||||||||.||||||||||||||||||||..||||.||||
BSU04960___yd 1101 ACGCTTGGGGAGTGTTTACCTACTGAAAGCAATGTTAGGGGTTATCGTTC 1150
BSNT_00855 1142 TGTTTGTGTACGTGACATGTTTTATCGTTGACAAGTTAATACCTCCAAAC 1191
||||||||||||||||.||||||||.|||||||||||||||||.|||||.
BSU04960___yd 1151 TGTTTGTGTACGTGACTTGTTTTATTGTTGACAAGTTAATACCGCCAAAT 1200
BSNT_00855 1192 GGTTTCGGAATGTATCTTTTGAATGTTGCTGTCCTTGCCTCAATTTTGTG 1241
|||||.||||||||||||||.|||||||||||||||||.|||||.|||||
BSU04960___yd 1201 GGTTTTGGAATGTATCTTTTAAATGTTGCTGTCCTTGCTTCAATCTTGTG 1250
BSNT_00855 1242 GATTGGTTTTCACAAGAGGGATGCTATTATCAAGTTTGTGACTGCTGGAA 1291
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU04960___yd 1251 GATTGGTTTTCACAAGAGGGATGCCATTATCAAGTTTGTGACTGCTGGAA 1300
BSNT_00855 1292 AAGTAGTTTCAGTTGATAATAATATGATGGAAAACATGAGACAAAACATT 1341
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 1301 AAGTTGTTTCAGTTGATAATAATATGATGGAAAACATGAGACAAAACATT 1350
BSNT_00855 1342 GTTCAGCCTGCTTGGGAACAAGCAAAGAAAATAGGTGGAGTATGGGGTAA 1391
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU04960___yd 1351 GTTCAGCCTGCTTGGGAACAAGCGAAGAAAATAGGTGGAGTATGGGGTAA 1400
BSNT_00855 1392 CGGAGGCGGCGTATTTACTGACTTTACAAAGCATTTTGGGGGAAGAAAAG 1441
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 1401 CGGAGGCGGCGTATTTACTGACTTTACAAAGCATTTTGGGGGAAGAAAAG 1450
BSNT_00855 1442 ACGGTTCGAATGCTGATGGCGTAACTGGTGCTCCAAGTGGTGGCGGCAAT 1491
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU04960___yd 1451 ACGGTTCGAATGCTGATGGCGTAACTGGTGCTCCAAGTGGTGGCGGTAAT 1500
BSNT_00855 1492 TCACCGAGTGGGGCTGCTATGGGATATGATAATACTCACGCCATTTCAAG 1541
||||||||||||.|||||||||||||||||||||||||.||.||||||||
BSU04960___yd 1501 TCACCGAGTGGGACTGCTATGGGATATGATAATACTCATGCTATTTCAAG 1550
BSNT_00855 1542 AACTCCACAAAAAGAGACTGCTAACGGAATAGCTAGTCATAACAGCCGCA 1591
|||.||.||||||||.||.||||||||||||||||.|||||||||.||.|
BSU04960___yd 1551 AACCCCGCAAAAAGAAACAGCTAACGGAATAGCTAATCATAACAGTCGAA 1600
BSNT_00855 1592 ACTTAAAACGAAATCCTCAAACTCTATCGAAAGAACAAGAAAAGCAAAAA 1641
.|||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04960___yd 1601 GCTTAAAACGCAATCCTCAAACTCTATCGAAAGAACAAGAAAAGCAAAAA 1650
BSNT_00855 1642 CAAAAGGAAGCCTTTGCAAATGCAAAAGATAATAAACAGCAATCCCATTT 1691
|||||.|||||||||||||||||||||||.||||||||||||||||||||
BSU04960___yd 1651 CAAAAAGAAGCCTTTGCAAATGCAAAAGAAAATAAACAGCAATCCCATTT 1700
BSNT_00855 1692 AGACAGATTGAGAAAAGACGGGATAAACTCTCCTATGCTGAAAGATGCTT 1741
||.||||||||||||||||||.|||||||||||||||.||||||||||||
BSU04960___yd 1701 AGCCAGATTGAGAAAAGACGGAATAAACTCTCCTATGTTGAAAGATGCTT 1750
BSNT_00855 1742 TGAATGAAGGAAATGAGGATTTATCCAAACGAGCACCTATCTTGCAGGAT 1791
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU04960___yd 1751 TGAATGAAGGGAATGAGGATTTATCCAAACGAGCACCTATCTTGCAGGAT 1800
BSNT_00855 1792 AAAAAGGATGAATCAGCTAGAACAGATCAAAAAGAATATGTTGAACAGCT 1841
|||||.|||||||||||..||||||||||||||||||||||.||||||||
BSU04960___yd 1801 AAAAAAGATGAATCAGCACGAACAGATCAAAAAGAATATGTGGAACAGCT 1850
BSNT_00855 1842 TCTTAAACAGCCAGATAATCAGAAACAAACTGACGATGCATCATTACAAC 1891
||||||||||||..||||.|||.|||||||||||||||||||||||||.|
BSU04960___yd 1851 TCTTAAACAGCCCAATAACCAGCAACAAACTGACGATGCATCATTACAGC 1900
BSNT_00855 1892 TTGAAGAAGAAACTACTTCTAATCGAGCACCAGTCTTACAAGAGAGTGAG 1941
.||||||||||.|||||||||||||.||.||.|||||||||||||.|||.
BSU04960___yd 1901 ATGAAGAAGAATCTACTTCTAATCGTGCGCCTGTCTTACAAGAGAATGAA 1950
BSNT_00855 1942 AAAGAAACAGAACGTACAGACCAAAAGGCATATGTTCATGAAGGACAAAA 1991
|||||.|||||||||||.||.||.||.||.|||.||.||||.|.||||||
BSU04960___yd 1951 AAAGATACAGAACGTACTGATCAGAAAGCGTATATTTATGACGAACAAAA 2000
BSNT_00855 1992 CCAGAATACTGAAACTGAAAAACATCATGACTTTGAAGTTCAGAAAGATG 2041
.||||||..||||||.||..|.||.||.||.||||||||.||||||||||
BSU04960___yd 2001 TCAGAATCTTGAAACAGATCAGCAACAAGATTTTGAAGTCCAGAAAGATG 2050
BSNT_00855 2042 ATTCTGTTTCAAAGAGTGAGCCAGTAGCACAAGAGAAGACAGCAGAAATC 2091
||||||||||.||.||||||||.||||||||||||||.||||||||||||
BSU04960___yd 2051 ATTCTGTTTCCAATAGTGAGCCTGTAGCACAAGAGAAAACAGCAGAAATC 2100
BSNT_00855 2092 AAAAGATCAGACCAAAAAGTCATGACGAATCAATCTGAACCGCAGCTCGG 2141
|||.|||||||.|||||||||||||.|||||||.||||||||||||||||
BSU04960___yd 2101 AAACGATCAGATCAAAAAGTCATGATGAATCAACCTGAACCGCAGCTCGG 2150
BSNT_00855 2142 CTTTGAAAGTCCTCAATCTACAAAAGTAGAAAATCAGTCTATTGCCAATA 2191
.|||||||||||||||||||||||||||||||||||..||||||||||||
BSU04960___yd 2151 TTTTGAAAGTCCTCAATCTACAAAAGTAGAAAATCAACCTATTGCCAATA 2200
BSNT_00855 2192 ACGAACGTAAAATCAGACCATCTGAACCAGCAAAAGTTCATTCAGATGGT 2241
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU04960___yd 2201 ACGAACGTAAAATCAGACCATCTGAACCCGCAAAAGTTCATTCAGATGGT 2250
BSNT_00855 2242 ATTCGTGTTGAGGAAAAACAGGCTGTTGCCCCTGCTGAAAGTAAGACTGT 2291
|||||||||||.|||||||||||||||||.||||||||||.|||||||||
BSU04960___yd 2251 ATTCGTGTTGATGAAAAACAGGCTGTTGCTCCTGCTGAAAATAAGACTGT 2300
BSNT_00855 2292 ATCAAGAGAAAAACAGCCTTCATCACAAAACATTAAACGGACTGAACAAA 2341
|||||||||||||||||||||||||||||..|||||||||||||||||||
BSU04960___yd 2301 ATCAAGAGAAAAACAGCCTTCATCACAAACAATTAAACGGACTGAACAAA 2350
BSNT_00855 2342 GTGTTAATACATTTGACCAAGTGTCTTTGAATGAAATTGCAAGACGCTCT 2391
|.||||||.|||||||||||||||||||||||||||||||||||||||||
BSU04960___yd 2351 GCGTTAATTCATTTGACCAAGTGTCTTTGAATGAAATTGCAAGACGCTCT 2400
BSNT_00855 2392 TCATCAAAAGTAGAAGATCGACTGAGAAGGGACGAGAGAAAAACGTTATA 2441
||||||||||||||||||||||||||||||||.||.||||.||..|.|
BSU04960___yd 2401 TCATCAAAAGTAGAAGATCGACTGAGAAGGGATGAAAGAACAAGATGA-- 2448
BSNT_00855 2442 A 2442
BSU04960___yd 2448 - 2448
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