Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00917 and BSU05340

See Amino acid alignment / Visit BSNT_00917 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:21
# Commandline: needle
#    -asequence dna-align/BSNT_00917___ydfA.1.22522.seq
#    -bsequence dna-align/BSU05340___ydfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00917___ydfA-BSU05340___ydfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00917___ydfA-BSU05340___ydfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00917___ydfA
# 2: BSU05340___ydfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity:    1299/1308 (99.3%)
# Similarity:  1299/1308 (99.3%)
# Gaps:           0/1308 ( 0.0%)
# Score: 6459.0
# 
#
#=======================================

BSNT_00917___      1 TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd      1 TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATT     50

BSNT_00917___     51 GGTCATATGGCAGCCGAAAAATTTATCTATAGGGTGGTCAGCCTGTGGAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd     51 GGTCATATGGCAGCCGAAAAATTTATCTATAGGGTGGTCAGCCTGTGGAG    100

BSNT_00917___    101 GCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    101 GCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTA    150

BSNT_00917___    151 ACTGTGACAGGGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    151 ACTGTGACAGGGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCAT    200

BSNT_00917___    201 ACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAATGGGCAGCGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    201 ACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAATGGGCAGCGC    250

BSNT_00917___    251 TTCATATGGCTAAGGCTGCAAAAGGAAACGGTGTGCGGATGTTCGTTTAT    300
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05340___yd    251 TTCATATGGCTAAGGCTGCAAAAGGATACGGTGTGCGGATGTTCGTTTAT    300

BSNT_00917___    301 GTATCTCTATTAGGAGCTATTGTCGCCGCGTTATTTGCAAATGACGGTGC    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU05340___yd    301 GTATCTCTATTAGGAGCTATCGTCGCCGCGTTATTTGCAAATGACGGTGC    350

BSNT_00917___    351 AGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    351 AGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT    400

BSNT_00917___    401 TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    401 TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCG    450

BSNT_00917___    451 GATACCACTTCGCTTCCTTTAGTAGTGAGCAATTTGGTCAACATTGTTTC    500
                     ||||||||||||||||||||.|||||.|||||||||||||||||||||||
BSU05340___yd    451 GATACCACTTCGCTTCCTTTTGTAGTAAGCAATTTGGTCAACATTGTTTC    500

BSNT_00917___    501 AGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    501 AGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTG    550

BSNT_00917___    551 TCCCGTACTTGTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTC    600
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    551 TCCCGTACCTGTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTC    600

BSNT_00917___    601 TTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGGTTAAAAAACC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    601 TTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGGTTAAAAAACC    650

BSNT_00917___    651 TGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    651 TGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCT    700

BSNT_00917___    701 TAGGGCTGCTGTTAATTGGATATTTTGCAAGTGAATTTTTTTCTATCCCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    701 TAGGGCTGCTGTTAATTGGATATTTTGCAAGTGAATTTTTTTCTATCCCT    750

BSNT_00917___    751 GTATCAGTGGTAGCGGGCAGCATTGCGATCATTTTCTTAATCGCTGCGCA    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05340___yd    751 GTATCAGTGGTAGCGGGCAGCATTGCAATCATTTTCTTAATCGCTGCGCA    800

BSNT_00917___    801 AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    801 AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGG    850

BSNT_00917___    851 CTATCGTATTCTTTTCAATTGGCATGTACGTTGTTGTGTATGGTGTCCGA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    851 CTATCGTATTCTTTTCAATTGGCATGTACGTTGTTGTGTATGGTGTCCGA    900

BSNT_00917___    901 AATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    901 AATGCCGGATTAACGGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGA    950

BSNT_00917___    951 TCAAGGATTGTTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd    951 TCAAGGATTGTTTGCTGGGACAATTGGAATGGGCTTTATTGCGGCGATTC   1000

BSNT_00917___   1001 TTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGACGCATTGGCT   1050
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU05340___yd   1001 TTTCTTCCATTATGAATAACTTGCCGACTGTTATGATTGACGCATTGGCC   1050

BSNT_00917___   1051 ATTGCCGGTACAGACACACATGGGATGATGAGAGAAGCGCTTATTTATGC   1100
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05340___yd   1051 ATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTTATTTATGC   1100

BSNT_00917___   1101 AAATGTGATCGGTTCAGATTTAGGGCCTAAAATAACACCGATTGGTTCCT   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd   1101 AAATGTGATCGGTTCAGATTTAGGGCCTAAAATAACACCGATTGGTTCCT   1150

BSNT_00917___   1151 TGGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT   1200
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd   1151 TAGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAGATT   1200

BSNT_00917___   1201 TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd   1201 TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTT   1250

BSNT_00917___   1251 ATTGATCACACTTGTCGGCCTGTATATTTGGCTGCTGATAATCCATTCTT   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05340___yd   1251 ATTGATCACACTTGTCGGCCTGTATATTTGGCTGCTGATAATCCATTCTT   1300

BSNT_00917___   1301 GTTTCTAA   1308
                     ||||||||
BSU05340___yd   1301 GTTTCTAA   1308


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