Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00921 and BSU05350

See Amino acid alignment / Visit BSNT_00921 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:21
# Commandline: needle
#    -asequence dna-align/BSNT_00921___ydfB.1.22522.seq
#    -bsequence dna-align/BSU05350___ydfB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00921___ydfB-BSU05350___ydfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00921___ydfB-BSU05350___ydfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00921___ydfB
# 2: BSU05350___ydfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     761/786 (96.8%)
# Similarity:   761/786 (96.8%)
# Gaps:           9/786 ( 1.1%)
# Score: 3741.0
# 
#
#=======================================

BSNT_00921___      1 ---------TTGCAGGAATTAACAAAAGAAAAGTATAGTAGCTTAAAAAC     41
                              ||||||||||||||||||.||||.||.||||||||||||||
BSU05350___yd      1 TTGTCTGTTTTGCAGGAATTAACAAAAAAAAAATACAGTAGCTTAAAAAC     50

BSNT_00921___     42 AATGTTTGATGACAAATATTGTCCCACATTTGTCTATTCAATATTAGACC     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd     51 AATGTTTGATGACAAATATTGTCCCACATTTGTCTATTCAATATTAGACC    100

BSNT_00921___     92 AAACCATTCCGGGAGCTGTTTATGCAGATGATCAAACCTTTCCTAAATCG    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    101 AAACCATTCCGGGAGCTGTTTATGCAGATGATCAAACCTTTCCTAAATCG    150

BSNT_00921___    142 TTTTTTATAGGAACTGAATCAGGCATTTATTTTATTGCGGGAGACCAAGG    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    151 TTTTTTATAGGAACTGAATCAGGCATTTATTTTATTGCGGGAGACCAAGG    200

BSNT_00921___    192 GAATCGGGATTTTCATGATTTCATTGCAGGATATTATGAAGAACAAGTGA    241
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    201 GAATCGGGATTTTCATGATTTCATTGCAGGATATTATGAAGAACAAGTGA    250

BSNT_00921___    242 AATCATCAAAACGATTTACCTTGTTTTCTTCCAGTGATACATGGGATAGC    291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    251 AATCATCAAAACGATTTACCTTGTTTTCTTCCAGTGATACATGGGATAGC    300

BSNT_00921___    292 GTACTGAAACCCATACTGAAAGATGACTTAAACCAAATGAGAAGAGCTGC    341
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    301 GTACTGAAACCCATACTGAAAGATGACTTAAACCAAATGAGAAGAGCTGC    350

BSNT_00921___    342 ATTTTCTTATCAACCAAAATATCCCAAAAAGACTTTGCAACTGCCAAAGG    391
                     ||||||||||||||||||||.|..||||||||||||||||||||||||||
BSU05350___yd    351 ATTTTCTTATCAACCAAAATCTTTCAAAAAGACTTTGCAACTGCCAAAGG    400

BSNT_00921___    392 GTCTTGTATTGAAAAGAATAGACGAAGACATCATTTCACACAGCACAGCG    441
                     |.|||||||||||||||||.||||||||||||||||||||.|||||||||
BSU05350___yd    401 GGCTTGTATTGAAAAGAATTGACGAAGACATCATTTCACATAGCACAGCG    450

BSNT_00921___    442 TTTAACAGCGCGTATTATGAGGAGTATTGGGATTCTGTCTCACAGTTTGC    491
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU05350___yd    451 TTTAACAGCGCGTATTATGAGGAGTATTGGAATTCTGTCTCACAGTTTGC    500

BSNT_00921___    492 TTCAAAAGGTTTTGGATTTGCCGTATTACATGGCAATCATGTAGTAAGTG    541
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU05350___yd    501 TTCAAAAGGTTTTGGATTTGCCGTATTACATGGCAATCACGTAGTAAGTG    550

BSNT_00921___    542 AGTGTACCTCTATATTTTTAGGGCATAATCGAGCGGAAATGGATATCTAT    591
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    551 AGTGTACCTCTATATTTTTAGGGCATAATCGAGCGGAAATGGATATCTAT    600

BSNT_00921___    592 ACACTTGAGGAATATAGAGGACTGGGGTTAGCTTATTGCGTAGCAAATAA    641
                     ||||||||.||||||||||||||||||||||||||||||||||||||||.
BSU05350___yd    601 ACACTTGAAGAATATAGAGGACTGGGGTTAGCTTATTGCGTAGCAAATAG    650

BSNT_00921___    642 GTTTATAGCGTTTTGTATGGAAAATGGGATTGTTCCTAGCTGGGATTGTG    691
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    651 GTTTATAGCGTTTTGTATGGAAAATGGGATTGTTCCTAGCTGGGATTGTG    700

BSNT_00921___    692 ATATCTGCAACAATTCGTCCATTGCATTAGCAGCTAAACTAGGGTTTAAG    741
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU05350___yd    701 ATATTTGCAACAATTCGTCCATTGCATTAGCAGCTAAACTAGGGTTTAAG    750

BSNT_00921___    742 CCGATAACGGAATACACTATTTACTACTCTGGCTAA    777
                     .||.||||||||||||||||||||||||||||||||
BSU05350___yd    751 ACGGTAACGGAATACACTATTTACTACTCTGGCTAA    786


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00921 and BSU05350

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
