Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00966 and BSU05590

See Amino acid alignment / Visit BSNT_00966 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:25
# Commandline: needle
#    -asequence dna-align/BSNT_00966___ydgD.1.22522.seq
#    -bsequence dna-align/BSU05590___ydgD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00966___ydgD-BSU05590___ydgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00966___ydgD-BSU05590___ydgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00966___ydgD
# 2: BSU05590___ydgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     325/345 (94.2%)
# Similarity:   325/345 (94.2%)
# Gaps:          15/345 ( 4.3%)
# Score: 1605.0
# 
#
#=======================================

BSNT_00966___      1 ---------------ATGAAAGTCAGTTTGGCAGTTTTTATGCTTGCGGG     35
                                    |||||||||||||||||||||||||||||||||||
BSU05590___yd      1 ATGATATCTATTATGATGAAAGTCAGTTTGGCAGTTTTTATGCTTGCGGG     50

BSNT_00966___     36 AGGCATCATAAAGGTAAGCCGCGTTCCCTTTCAAGTTGAGCATTGGCGGC     85
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd     51 AGGCATCATAAAGGTAAGCCGCGTTCCCTTTCAAGTTGAGCATTGGCGGC    100

BSNT_00966___     86 ATTATCAATATCCATTATGGTTTCTGACTGTTACTGGCATTCTTGAAATA    135
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd    101 ATTATCAATATCCATTATGGTTTCTGACTGTTACTGGCATTCTTGAAATA    150

BSNT_00966___    136 GCCGGGGCACTTGCTATGACAGCGGGAATTTGGAATCGGTATGCAGCAAT    185
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05590___yd    151 GCCGGGGCACTTGCTATGACAGCGGGAATTTGGAATCGGTATGCAGCAAT    200

BSNT_00966___    186 TGGAGCAGGTGTTCTGTTTGTCGTTCTCATGGCGGGAGCCATTCATGCGC    235
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU05590___yd    201 TGGAGCAGGTGTTCTGTTTGTCGTTCTCATGGCGGGAGCAATTCATGCGC    250

BSNT_00966___    236 ATATGTTTCGAGCAAGACAATCGGTCATCATGGCGATACCAGCGATGATT    285
                     ||||||||||||||||||||||.||||||||||||||||.||||||||||
BSU05590___yd    251 ATATGTTTCGAGCAAGACAATCTGTCATCATGGCGATACAAGCGATGATT    300

BSNT_00966___    286 TGTTTGATTGTTTCTATCATGATCATCCTGGGGAGTTACACGTAA    330
                     ||||||||||||||.||||||||||||.|||||||||||||||||
BSU05590___yd    301 TGTTTGATTGTTTCAATCATGATCATCATGGGGAGTTACACGTAA    345


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