Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00967 and BSU05600

See Amino acid alignment / Visit BSNT_00967 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:25
# Commandline: needle
#    -asequence dna-align/BSNT_00967___ydgE.1.22522.seq
#    -bsequence dna-align/BSU05600___ydgE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00967___ydgE-BSU05600___ydgE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00967___ydgE-BSU05600___ydgE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00967___ydgE
# 2: BSU05600___ydgE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     466/474 (98.3%)
# Similarity:   466/474 (98.3%)
# Gaps:           0/474 ( 0.0%)
# Score: 2298.0
# 
#
#=======================================

BSNT_00967___      1 ATGGCATTCACTTTGGAAGACATGACTGAGGAAGAGTTCGAAGCCTTTCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05600___yd      1 ATGGCATTCACTTTGGAAGACATGACTGAGGAAGAGTTCGAAGCCTTTCG     50

BSNT_00967___     51 CGGGATGTCCGTGCAAAATTATGCGAAACAAAACATAACGTCAGGAACTT    100
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU05600___yd     51 CGGGATGTCCGTGCAAAATTTTGCGAAACAAAACATAACGTCAGGAACTT    100

BSNT_00967___    101 GGACGGAAAAAGAGGCGCTTGAGAAATCGGAGCAGGCATATGAGAACATG    150
                     ||||||||||||||||..||||||||||||||||||||||||||||||||
BSU05600___yd    101 GGACGGAAAAAGAGGCATTTGAGAAATCGGAGCAGGCATATGAGAACATG    150

BSNT_00967___    151 GTTCCGAATGGGCGAGACAGCAGCAATCATTATTTTTGGAACATCACAAA    200
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU05600___yd    151 ATTCCGAATGGGCGAGACAGCAGCAATCATTATTTTTGGAACATCACAAA    200

BSNT_00967___    201 TGACCAAGGGGAAAGAATGGGCTGGCTCTGGCTGTATGCTGATCCGTTTC    250
                     |||||||||.|||||||||||||||||||||||||||||||||||.||.|
BSU05600___yd    201 TGACCAAGGAGAAAGAATGGGCTGGCTCTGGCTGTATGCTGATCCATTAC    250

BSNT_00967___    251 ATCCGCAAAAGGAAGCGTTTATCTATTCCTTTGGATTGTATGAAGCCTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05600___yd    251 ATCCGCAAAAGGAAGCGTTTATCTATTCCTTTGGATTGTATGAAGCCTTT    300

BSNT_00967___    301 CGCGGAAAAGGACTTGCTCAATTGGCGCTTCAAACGCTTGATGAAAGAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05600___yd    301 CGCGGAAAAGGACTTGCTCAATTGGCGCTTCAAACGCTTGATGAAAGAGC    350

BSNT_00967___    351 AAGAGAGCTTGGTGCGGAAAGGCTGGCTCTACATGTATTTGCACACAACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05600___yd    351 AAGAGAGCTTGGTGCGGAAAGGCTGGCTCTACATGTATTTGCACACAACG    400

BSNT_00967___    401 AGACAGCCGTCTATCTTTATCAGAAGATGGGCTATGCCTTGACCAATATA    450
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05600___yd    401 AGACAGCCGTCTATCTTTATCAGAAGATGGGCTATGCCATGACCAATATA    450

BSNT_00967___    451 CGTATGCGGAAACAGCTATGCTGA    474
                     ||||||||||||||||||||||||
BSU05600___yd    451 CGTATGCGGAAACAGCTATGCTGA    474


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