Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00973 and BSU05640

See Amino acid alignment / Visit BSNT_00973 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:27
# Commandline: needle
#    -asequence dna-align/BSNT_00973___ydgG.1.22522.seq
#    -bsequence dna-align/BSU05640___ydgG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00973___ydgG-BSU05640___ydgG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00973___ydgG-BSU05640___ydgG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00973___ydgG
# 2: BSU05640___ydgG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity:     456/459 (99.3%)
# Similarity:   456/459 (99.3%)
# Gaps:           0/459 ( 0.0%)
# Score: 2268.0
# 
#
#=======================================

BSNT_00973___      1 TTGAATGAACAAAAGCTATGTCAGGCGATAAACCTGTTTGTGGAAGTCCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd      1 TTGAATGAACAAAAGCTATGTCAGGCGATAAACCTGTTTGTGGAAGTCCT     50

BSNT_00973___     51 GCTTGAAGGGACAGAATTTGTGCATCGTGAAATCAATCAGGATGTCTTCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd     51 GCTTGAAGGGACAGAATTTGTGCATCGTGAAATCAATCAGGATGTCTTCA    100

BSNT_00973___    101 AGCATATCTCAAGGGAACAGGCAGACCTGTTGAAAATTTTAAAAGTCAAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd    101 AGCATATCTCAAGGGAACAGGCAGACCTGTTGAAAATTTTAAAAGTCAAG    150

BSNT_00973___    151 GGCCCAACCTCTCCCGGCAGCCTGGCCATGTACCAAAATGTACATAAGAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd    151 GGCCCAACCTCTCCCGGCAGCCTGGCCATGTACCAAAATGTACATAAGAG    200

BSNT_00973___    201 CGCGATCTCTAACAGACTGAAAAAGCTGCTCGAAAAGGGATTGGTTCAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd    201 CGCGATCTCTAACAGACTGAAAAAGCTGCTCGAAAAGGGATTGGTTCAAT    250

BSNT_00973___    251 GGGACGACTGTCCGGAAAAAAGTGATAGGCGCTCTAAGCTTATTAACATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd    251 GGGACGACTGTCCGGAAAAAAGTGATAGGCGCTCTAAGCTTATTAACATT    300

BSNT_00973___    301 ACACCCAGTGGTGAACACATACTAGAAGAATTAGATTCTGCCATCTTTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd    301 ACACCCAGTGGTGAACACATACTAGAAGAATTAGATTCTGCCATCTTTAA    350

BSNT_00973___    351 CGCGCTCAAACCGCTGATTGATGATATAGATGAGGAACACTTACATTCCA    400
                     |||||||||||||.||||||||||||||||||||||||||||||||||.|
BSU05640___yd    351 CGCGCTCAAACCGTTGATTGATGATATAGATGAGGAACACTTACATTCTA    400

BSNT_00973___    401 TTATCGAGATATTCACCATTTTAAAAAGCAAATTTAAAGGAGGAGATTCT    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU05640___yd    401 TCATCGAGATATTCACCATTTTAAAAAGCAAATTTAAAGGAGGAGATTCT    450

BSNT_00973___    451 GCCGAATGA    459
                     |||||||||
BSU05640___yd    451 GCCGAATGA    459


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.