Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00981 and BSU05680

See Amino acid alignment / Visit BSNT_00981 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:28
# Commandline: needle
#    -asequence dna-align/BSNT_00981___ydgK.1.22522.seq
#    -bsequence dna-align/BSU05680___ydgK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00981___ydgK-BSU05680___ydgK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00981___ydgK-BSU05680___ydgK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00981___ydgK
# 2: BSU05680___ydgK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1209
# Identity:    1197/1209 (99.0%)
# Similarity:  1197/1209 (99.0%)
# Gaps:           0/1209 ( 0.0%)
# Score: 5937.0
# 
#
#=======================================

BSNT_00981___      1 ATGCTGCACAATCCAACTGGAAAAGAACGCTTGGCACTAGCGTTTCTGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd      1 ATGCTGCACAATCCAACTGGAAAAGAACGCTTGGCACTAGCGTTTCTGCT     50

BSNT_00981___     51 CGGTATGCTTGCTATATTGGGCCCGCTTAATATAGATATGTATTTGCCAA    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd     51 CGGCATGCTTGCTATATTGGGCCCGCTTAATATAGATATGTATTTGCCAA    100

BSNT_00981___    101 GTTTTCCTGAAATCGCGGAAGATTTATCAGCAAGTGCTTCACTTGTTCAG    150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU05680___yd    101 GTTTTCCTGAAATCGCGAAAGATTTATCAGCAAGTGCTTCACTTGTTCAG    150

BSNT_00981___    151 TTAAGTTTAACAGCCTGTCTGGTCGGACTTACGATCGGCCAGCTGATTGT    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU05680___yd    151 TTAAGTTTAACAGCCTGTCTGGTCGGGCTTACGATCGGCCAGCTGATTGT    200

BSNT_00981___    201 CGGGCCGGTCAGCGATGCGCAGGGAAGACGAAAACCGCTATTAATCTGTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    201 CGGGCCGGTCAGCGATGCGCAGGGAAGACGAAAACCGCTATTAATCTGTA    250

BSNT_00981___    251 TTTTTTTATTTGCGTTATCTTCTCTGTTTTGTGCACTGTCGCCCAATATA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    251 TTTTTTTATTTGCGTTATCTTCTCTGTTTTGTGCACTGTCGCCCAATATA    300

BSNT_00981___    301 ACAACTTTAGTGGCTGCGCGTTTTTTACAAGGCTTCACTGCTTCTGCAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    301 ACAACTTTAGTGGCTGCGCGTTTTTTACAAGGCTTCACTGCTTCTGCAGG    350

BSNT_00981___    351 GCTTGTGCTGTCTCGCGCAATCGTCCGCGATGTGTTTACCGGAAGAGAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    351 GCTTGTGCTGTCTCGCGCAATCGTCCGCGATGTGTTTACCGGAAGAGAGC    400

BSNT_00981___    401 TTTCTAAATTTTTCTCGCTGTTAATGGTCATTACCGCGGTGGCGCCAATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    401 TTTCTAAATTTTTCTCGCTGTTAATGGTCATTACCGCGGTGGCGCCAATG    450

BSNT_00981___    451 GTTGCGCCTATGACAGGCGGTGCCATTTTGCTTTTGCCGTTCGCAACGTG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    451 GTTGCGCCTATGACAGGCGGTGCCATTTTGCTTTTGCCGTTCGCAACGTG    500

BSNT_00981___    501 GCATACAATTTTTCACGTCCTCATGATCATCGGATTTTTACTAGTTCTTC    550
                     |||||||||||||||||||.|.||||||||||||||||||||||||||||
BSU05680___yd    501 GCATACAATTTTTCACGTCTTAATGATCATCGGATTTTTACTAGTTCTTC    550

BSNT_00981___    551 TGATTGCATTGAGGTTAAAAGAAACGCTTCCGCCGGAAAAACGGATTCCA    600
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU05680___yd    551 TGATTGCATTGAGGTTAAAAGAAACGCTTCCGCTGGAAAAACGGATTCCA    600

BSNT_00981___    601 AGCTCAATCGGAACATCCGTCAAAACGATGGGCAGCCTGCTGAAGGATCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    601 AGCTCAATCGGAACATCCGTCAAAACGATGGGCAGCCTGCTGAAGGATCG    650

BSNT_00981___    651 ATCCTTTATGGGGTACGCGTTAACTGTCGGATTTATTCACGGGGGAAGCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    651 ATCCTTTATGGGGTACGCGTTAACTGTCGGATTTATTCACGGGGGAAGCT    700

BSNT_00981___    701 TTGCATATGTGTCTGGTACGCCTTTTGTATACCAGGATATCTACGGGGTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    701 TTGCATATGTGTCTGGTACGCCTTTTGTATACCAGGATATCTACGGGGTG    750

BSNT_00981___    751 TCGCCGCAGGTATTTAGTATTCTTTTTGGCATTAACGGGCTGGCGATTAT    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    751 TCTCCGCAGGTATTTAGTATTCTTTTTGGCATTAACGGGCTGGCGATTAT    800

BSNT_00981___    801 ATCGGGCAGCTTTATCATCGGACGCTTTGGCGGAATCATTCATGAAAAAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    801 ATCGGGCAGCTTTATCATCGGACGCTTTGGCGGAATCATTCATGAAAAAA    850

BSNT_00981___    851 GCCTGCTTCGTATAGCGGTCATTACGGCTATGATTGCGACGGCTGTGCTA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    851 GCCTGCTTCGTATAGCGGTCATTACGGCTATGATTGCGACGGCTGTGCTA    900

BSNT_00981___    901 TTAACCATGACCATGATTCACGGTCCTCTTGCTACATTAGTCATATCCAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    901 TTAACCATGACCATGATTCACGGTCCTCTTGCTACATTAGTCATATCCAT    950

BSNT_00981___    951 TTTCATTTACATGATTACGATCGGCATGGTTCTGACCAGCACGTTTACCC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd    951 TTTCATTTACATGATTACGATCGGCATGGTTCTGACCAGCACGTTTACCC   1000

BSNT_00981___   1001 TGGCCATGGAAAAGCAGGGGCACCGCGCCGGAAGTGCAAGTGCGCTGCTT   1050
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd   1001 TAGCCATGGAAAAGCAGGGGCACCGCGCCGGAAGTGCAAGTGCGCTGCTT   1050

BSNT_00981___   1051 GGGATGCTCCCGCTGCTCCTTGGTTCAATCGTGTCACCGCTTGTAGGCAT   1100
                     ||.|||||.|||||||||||.|||||||||||||||||||||||||||||
BSU05680___yd   1051 GGAATGCTTCCGCTGCTCCTCGGTTCAATCGTGTCACCGCTTGTAGGCAT   1100

BSNT_00981___   1101 TAATGAGACAACAGCCGTTCCGATGGGAGCCATCATGTTTGTAACAGCTG   1150
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU05680___yd   1101 TAATGAGACAACAGCCGTTCCGATGGGAGCCATCATGTTTGTGACAGCTG   1150

BSNT_00981___   1151 TCATCGGCTCACTGGCGTTTTTTGGATTAACGAAAGAACGAGTAGGGCAG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05680___yd   1151 TCATCGGCTCACTGGCGTTTTTTGGATTAACGAAAGAACGAGTAGGGCAG   1200

BSNT_00981___   1201 AATTCATAA   1209
                     |||||||||
BSU05680___yd   1201 AATTCATAA   1209


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