Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00984 and BSU05710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:28
# Commandline: needle
# -asequence dna-align/BSNT_00984___ydhD.1.22522.seq
# -bsequence dna-align/BSU05710___ydhD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00984___ydhD-BSU05710___ydhD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00984___ydhD-BSU05710___ydhD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00984___ydhD
# 2: BSU05710___ydhD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1263
# Identity: 1241/1263 (98.3%)
# Similarity: 1241/1263 (98.3%)
# Gaps: 0/1263 ( 0.0%)
# Score: 6117.0
#
#
#=======================================
BSNT_00984___ 1 ATGTTTATCCATATCGTCGGGCCTGGTGATTCTTTGTTTTCGATAGGCAG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 1 ATGTTTATCCATATCGTCGGGCCTGGTGATTCTTTGTTTTCGATAGGCAG 50
BSNT_00984___ 51 AAGATACGGTGCTTCTGTTGATCAAATACGGGGTGTGAATGGTTTAGATG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 51 AAGATACGGTGCTTCTGTTGATCAAATACGGGGTGTGAATGGTTTAGATG 100
BSNT_00984___ 101 AAACGAATATCGTGCCGGGGCAGGCTCTGCTTATCCCTCTTTATGTATAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 101 AAACGAATATCGTGCCGGGGCAGGCTCTGCTTATCCCTCTTTATGTATAT 150
BSNT_00984___ 151 ACAGTCCAGCCTGGAGATACGCTTACCGCCATTGCAGCCAAAGCGTTTGT 200
|||||||||||..|||||||||||||||||||||||||.|||||||||||
BSU05710___yd 151 ACAGTCCAGCCGAGAGATACGCTTACCGCCATTGCAGCTAAAGCGTTTGT 200
BSNT_00984___ 201 GCCATTAGAGCGACTGCGAGCCGCCAATCCGGGCATCAGCCCAAATGCTT 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU05710___yd 201 GCCATTAGAGCGACTGCGAGCGGCCAATCCGGGCATCAGCCCAAATGCTT 250
BSNT_00984___ 251 TACAAGCGGGAGCAAAAATAACGATTCCTTCGATCTCAAATTACATTGCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 251 TACAAGCGGGAGCAAAAATAACGATTCCTTCGATCTCAAATTACATTGCG 300
BSNT_00984___ 301 GGAACGTTAAGTTTTTACGTGCTCCGAAATCCTGACCTCGATCGGGAATT 350
|||||||||||||||||.|||||||||||.||.|||||||||||||||||
BSU05710___yd 301 GGAACGTTAAGTTTTTATGTGCTCCGAAACCCAGACCTCGATCGGGAATT 350
BSNT_00984___ 351 AATCAATGATTATGCGCCATACTCGTCTTCGATTTCGATTTTCGAATACC 400
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU05710___yd 351 AATCAATGATTATGCGCCATACTCGTCTTCGATTTCAATTTTCGAATACC 400
BSNT_00984___ 401 ATATTGCACCGAACGGCGACATTGCAAACCAATTGAATGATGCGGCCGCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 401 ATATTGCACCGAACGGCGACATTGCAAACCAATTGAATGATGCGGCCGCT 450
BSNT_00984___ 451 ATTGAGACAACATGGCAAAGACGGGTGACGCCGCTGGCAACAATAACGAA 500
|||||||||||.|||||||||||.||.|||||||||||||||||||||||
BSU05710___yd 451 ATTGAGACAACTTGGCAAAGACGAGTCACGCCGCTGGCAACAATAACGAA 500
BSNT_00984___ 501 CCTTACATCAGGAGGCTTCAGTACGGAGATTGTTCACCAAGTGCTAAACA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 501 CCTTACATCAGGAGGCTTCAGTACGGAGATTGTTCACCAAGTGCTAAACA 550
BSNT_00984___ 551 ATCCGACAGCGAGAACCAATCTGGTCAACAACATTTATGACTTAGTTTCC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 551 ATCCGACAGCGAGAACCAATCTGGTCAACAACATTTATGACTTAGTTTCC 600
BSNT_00984___ 601 ACAAGGGGATATGGCGGTGTCACAATCGATTTTGAGCAGGTGAGCGCCGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 601 ACAAGGGGATATGGCGGTGTCACAATCGATTTTGAGCAGGTGAGCGCCGC 650
BSNT_00984___ 651 GGATCGCGATCTTTTCACTGGGTTTTTACGCCAGCTGAGAGATCGCCTTC 700
|||||||||||||||||||||.|||||||||||||||||||||||.||||
BSU05710___yd 651 GGATCGCGATCTTTTCACTGGATTTTTACGCCAGCTGAGAGATCGACTTC 700
BSNT_00984___ 701 AGGCGGGAGGGTATGTGCTGACGATAGCTGTTCCGGCAAAAACAAGCGAT 750
||||||||||||||||||||||||||||||||||.|||||||||||.|||
BSU05710___yd 701 AGGCGGGAGGGTATGTGCTGACGATAGCTGTTCCTGCAAAAACAAGTGAT 750
BSNT_00984___ 751 AATATTCCCTGGCTGAGAGGCTACGATTACGGGGGGATAGGAGCGGTTGT 800
|||||.||.||||||||.||||||||||||||||||||||||||||||||
BSU05710___yd 751 AATATCCCATGGCTGAGGGGCTACGATTACGGGGGGATAGGAGCGGTTGT 800
BSNT_00984___ 801 CAATTATATGTTTATCATGGCTTATGATTGGCATCATGCCGGAAGTGAGC 850
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU05710___yd 801 CAATTATATGTTTATCATGGCTTATGATTGGCATCATGCGGGAAGTGAGC 850
BSNT_00984___ 851 CGGGTCCTGTAGCGCCGATTACTGAAATAAGGAGAACCATTGAGTTTACG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 851 CGGGTCCTGTAGCGCCGATTACTGAAATAAGGAGAACCATTGAGTTTACG 900
BSNT_00984___ 901 ATTGCGCAGGTGCCGAGCAGAAAAATCATTATCGGAGTCCCGCTCTACGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 901 ATTGCGCAGGTGCCGAGCAGAAAAATCATTATCGGAGTCCCGCTCTACGG 950
BSNT_00984___ 951 GTACGACTGGATCATCCCGTACCAGCCGGGCACAGTTGCTTCAGCGATTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 951 GTACGACTGGATCATCCCGTACCAGCCGGGCACAGTTGCTTCAGCGATTT 1000
BSNT_00984___ 1001 CAAATCAAAACGCAATCGAAAGAGCGATGAGGTACCAATCCCCGATACAA 1050
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05710___yd 1001 CAAATCAAAACGCAATCGAAAGAGCGATGAGGTACCAAGCCCCGATACAA 1050
BSNT_00984___ 1051 TATTCAGCCGAATATCAATCACCGTTTTTCCGGTACAGTGATCAGCAGGG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 1051 TATTCAGCCGAATATCAATCACCGTTTTTCCGGTACAGTGATCAGCAGGG 1100
BSNT_00984___ 1101 GCGGACGCATGAGGTATGGTTTGAGGATGTCAGAAGCATGAGCCGGAAGA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05710___yd 1101 GCGGACGCATGAGGTATGGTTTGAGGATGTCAGAAGCATGAGCCGGAAGA 1150
BSNT_00984___ 1151 TGCAGATCGTCCGCGAATACAGATTGCAGGCTATTGGCGCTTGGCAGTTA 1200
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU05710___yd 1151 TGCAGATCGTCCGTGAATACAGATTGCAGGCTATTGGCGCTTGGCAGTTA 1200
BSNT_00984___ 1201 ACGCTGGGCTTTACACCGGGCCCATGGCTTCTGCGGAAATTTTTTACGAT 1250
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU05710___yd 1201 ACGCTGGGCTTTACGCCGGGCCCATGGCTTCTGCGGAAATTTTTTACGAT 1250
BSNT_00984___ 1251 CAGAAAAGTGTAA 1263
|||||||||||||
BSU05710___yd 1251 CAGAAAAGTGTAA 1263
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