Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00989 and BSU05740

See Amino acid alignment / Visit BSNT_00989 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:29
# Commandline: needle
#    -asequence dna-align/BSNT_00989___phoB.1.22522.seq
#    -bsequence dna-align/BSU05740___phoB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00989___phoB-BSU05740___phoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00989___phoB-BSU05740___phoB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00989___phoB
# 2: BSU05740___phoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1389
# Identity:    1369/1389 (98.6%)
# Similarity:  1369/1389 (98.6%)
# Gaps:           0/1389 ( 0.0%)
# Score: 6765.0
# 
#
#=======================================

BSNT_00989___      1 TTGAAAAAATTCCCGAAGAAATTACTGCCTATCGCGGTTTTATCATCTAT     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU05740___ph      1 TTGAAAAAATTCCCGAAGAAATTACTGCCTATCGCGGTTTTATCATCAAT     50

BSNT_00989___     51 TGCGTTCAGCAGCTTAGCCAGCGGCAGTGTGCCTGAAGCCAGCGCCCAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph     51 TGCGTTCAGCAGCTTAGCCAGCGGCAGTGTGCCTGAAGCCAGCGCCCAGG    100

BSNT_00989___    101 AAAAGAAAAAGGGGAACCAAGACGAAATTAAAAATGTTATTGTTCTGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph    101 AAAAGAAAAAGGGGAACCAAGACGAAATTAAAAATGTTATTGTTCTGATT    150

BSNT_00989___    151 GGTGATGGTATGGGTGTGTCTTACACGTCCGCTTATCGATACTTAAAGGA    200
                     |||||||||||||||||||||||.|||||.||||||||||||||||||||
BSU05740___ph    151 GGTGATGGTATGGGTGTGTCTTATACGTCTGCTTATCGATACTTAAAGGA    200

BSNT_00989___    201 TAATAAAAAGACAAAAGTTGTGGAGCCTACGGCTTTAGATCAGTACCTTG    250
                     ||||||||||||||||||||||||||||||||||||.||||||||.||||
BSU05740___ph    201 TAATAAAAAGACAAAAGTTGTGGAGCCTACGGCTTTTGATCAGTATCTTG    250

BSNT_00989___    251 TCGGCCAGCAAACAACTTACCCCGATGATCCTGAACAAAATGTAACGGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph    251 TCGGCCAGCAAACAACTTACCCCGATGATCCTGAACAAAATGTAACGGAT    300

BSNT_00989___    301 TCTGCAGCGGCGGCAACAGCTATGTCTGCGGGAATTAAAACATACAATAA    350
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU05740___ph    301 TCTGCAGCGGCGGCAACGGCTATGTCTGCGGGAATTAAAACATACAATAA    350

BSNT_00989___    351 TGCCATAGCCGTTGATAACGACGGATCAGAAGCCAAAACGGTGCTTGAAG    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU05740___ph    351 TGCCATAGCCGTTGATAACGACGGGTCAGAAGCCAAAACGGTGCTTGAAG    400

BSNT_00989___    401 CTGCGAAAGAAAAAGGAAAAGCAACAGGACTTGTGGCCACTTCAGAAATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph    401 CTGCGAAAGAAAAAGGAAAAGCAACAGGACTTGTGGCCACTTCAGAAATT    450

BSNT_00989___    451 ACACACGCCACTCCGGCCTCTTTCGGTTCACACGACCATAGCCGAAAAAA    500
                     |||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU05740___ph    451 ACACACGCCACTCCGGCCTCTTTTGGTTCACACGACCACAGCCGAAAAAA    500

BSNT_00989___    501 TATGAACTCAATTGCGGATGATTATTTTGATGAGATGGTCAACGGCAAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph    501 TATGAACTCAATTGCGGATGATTATTTTGATGAGATGGTCAACGGCAAGC    550

BSNT_00989___    551 ACAAAATTGATGTCCTTTTAGGCGGAGGAAAGAGCAATTTTGACCGTAAG    600
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU05740___ph    551 ACAAAATTGATGTCCTTCTAGGCGGAGGAAAGAGCAATTTTGACCGTAAG    600

BSNT_00989___    601 GACCGTAATTTGATTAAAGAATTCAAAAAGGCGGGGTACAGCTATGTGGA    650
                     |||||||||||||||||.||||||||||||||||||||||||||.|||||
BSU05740___ph    601 GACCGTAATTTGATTAAGGAATTCAAAAAGGCGGGGTACAGCTACGTGGA    650

BSNT_00989___    651 TAATCGCAAGGACATGCTGAAAAACAAAGACAGCCAAGTTCTCGGCCTAT    700
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph    651 TGATCGCAAGGACATGCTGAAAAACAAAGACAGCCAAGTTCTCGGCCTAT    700

BSNT_00989___    701 TCGCTGACGGCGGCCTGCCTAAAAAGATTGACCGGACGAAGGATGTTCCA    750
                     ||||||||||||||||||||||||||||||||||.|||||||||.|||||
BSU05740___ph    701 TCGCTGACGGCGGCCTGCCTAAAAAGATTGACCGTACGAAGGATATTCCA    750

BSNT_00989___    751 TCACTTAAAGACATGACAAACACAGCCATTAAAAAATTAAACAAGGATAA    800
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU05740___ph    751 TCACTTAAAGATATGACAAACACAGCCATTAAAAAATTAAACAAGGATAA    800

BSNT_00989___    801 AGACGGATTCTTCCTCATGGTGGAAGGCAGCCAAATTGACTGGGCGGGCC    850
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU05740___ph    801 AGACGGATTCTTCCTCATGGTGGAAGGCAGCCAGATTGACTGGGCGGGCC    850

BSNT_00989___    851 ATGACAATGATATCGTCGGCGCCATGAGCGAGATGGAAGACTTCGAACAA    900
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU05740___ph    851 ATGACAATGATATCGTTGGCGCCATGAGCGAGATGGAAGACTTCGAACAA    900

BSNT_00989___    901 GCTTATAAGGCAGCTATTGATTTCGCTAAAAAAGACAAGCACACATTGGT    950
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU05740___ph    901 GCTTATAAGGCGGCTATTGATTTCGCTAAAAAAGACAAGCACACATTGGT    950

BSNT_00989___    951 TGTCGCAACGGCTGACCACTCAACCGGCGGATATTCCATCGGTGCGGACG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph    951 TGTCGCAACGGCTGACCACTCAACCGGCGGATATTCCATCGGTGCGGACG   1000

BSNT_00989___   1001 GCATCTACAATTGGTTCAGTGAACCCATTAAAGCCGCAAAGCGCACACCA   1050
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1001 GCATCTACAACTGGTTCAGTGAACCCATTAAAGCCGCAAAGCGCACACCA   1050

BSNT_00989___   1051 GACTTTATGGCAGAAAAGATCGCTGACGGCGCGGATGTTGAAAAAACGTT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1051 GACTTTATGGCAGAAAAGATCGCTGACGGCGCGGATGTTGAAAAAACGTT   1100

BSNT_00989___   1101 GAAAACATATATCGATCAAAAGAAATTGGCTTTAACAAAAGCCGAAATTC   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1101 GAAAACATATATCGATCAAAAGAAATTGGCTTTAACAAAAGCCGAAATTC   1150

BSNT_00989___   1151 AATCTGTTGAAGAAGCGGCAAAATCGAAGGAAGTACTGGATATCGATAAC   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1151 AATCTGTTGAAGAAGCGGCAAAATCGAAGGAAGTACTGGATATCGATAAC   1200

BSNT_00989___   1201 GCAATCGAGAACATCTTTAATAAACGCTCTCACACTGGATGGACAACAGG   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1201 GCAATCGAGAACATCTTTAATAAACGCTCTCACACTGGATGGACAACAGG   1250

BSNT_00989___   1251 CGGACATACCGGTGAAGATGTTCCCGTCTATGCATACGGTCCGTCTAGTG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1251 CGGACATACCGGTGAAGATGTTCCCGTCTATGCATACGGTCCGTCTAGTG   1300

BSNT_00989___   1301 AGACATTTGCCGGCCAAATCGACAATACAGAAATCGCCAAAAATGTTTTC   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1301 AGACATTTGCCGGCCAAATCGACAATACAGAAATCGCCAAAAATGTTTTC   1350

BSNT_00989___   1351 AAGGCTTTACAATACAACATTAAGATTAACGATAAGTAA   1389
                     |||||||||||||||||||||||||||||||||||||||
BSU05740___ph   1351 AAGGCTTTACAATACAACATTAAGATTAACGATAAGTAA   1389


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