Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_00990 and BSU05750

See Amino acid alignment / Visit BSNT_00990 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:29
# Commandline: needle
#    -asequence dna-align/BSNT_00990___ydhG.1.22522.seq
#    -bsequence dna-align/BSU05750___ydhG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00990___ydhG-BSU05750___ydhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00990___ydhG-BSU05750___ydhG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00990___ydhG
# 2: BSU05750___ydhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity:     362/372 (97.3%)
# Similarity:   362/372 (97.3%)
# Gaps:           0/372 ( 0.0%)
# Score: 1770.0
# 
#
#=======================================

BSNT_00990___      1 ATGGACGTTTTTTCTGAGTATTTAGCGGGGATTGATGACCCGTTCCACCA     50
                     ||||||||||||||||||||.|||||||||||||.||||||||||||||.
BSU05750___yd      1 ATGGACGTTTTTTCTGAGTACTTAGCGGGGATTGCTGACCCGTTCCACCG     50

BSNT_00990___     51 AGAAAGAACGGAAGAGGTGTTGACTTGGATCAAAGATAAATATCCAAATT    100
                     |||||||||||||||||||||.||||||||.|||.|||||||||||||||
BSU05750___yd     51 AGAAAGAACGGAAGAGGTGTTAACTTGGATAAAAAATAAATATCCAAATT    100

BSNT_00990___    101 TACATACAGAAATAAAATGGAACCAACCGATGTTTACGGATCACGGTACA    150
                     ||||||||||||||||||||||.||.||||||||||||||||||||||||
BSU05750___yd    101 TACATACAGAAATAAAATGGAATCAGCCGATGTTTACGGATCACGGTACA    150

BSNT_00990___    151 TTTATTATTGGCTTTAGTGTTTCTAAAAAGCATTTAGCTGTCGCTCCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05750___yd    151 TTTATTATTGGCTTTAGTGTTTCTAAAAAGCATTTAGCTGTCGCTCCTGA    200

BSNT_00990___    201 AAAAGTAACGATAGCGCACGTAGAGGATGATATTGTGAAGGCCGGATATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05750___yd    201 AAAAGTAACGATAGCGCACGTAGAGGATGATATTGTGAAGGCCGGATATG    250

BSNT_00990___    251 ATTACACCGAGCAGCTGATACGTATCCCTTGGAACGGTCCAGTTGATTAC    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU05750___yd    251 ATTACACCGAGCAGCTGATACGTATCCCTTGGAACGGTCCAGTTGATTAT    300

BSNT_00990___    301 ACGCTACTTGAGAAAATGATTGAGTTTAATATTCTGGATAAGGCGGACTG    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU05750___yd    301 ACGCTACTTGAGAAAATGATTGAGTTTAATATTCTGGACAAGGCGGACTG    350

BSNT_00990___    351 CTCCACTTTTTGGCGGAAATGA    372
                     ||||||||||||||||||||||
BSU05750___yd    351 CTCCACTTTTTGGCGGAAATGA    372


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.