Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01002 and BSU05820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:30
# Commandline: needle
# -asequence dna-align/BSNT_01002.1.22522.seq
# -bsequence dna-align/BSU05820___gmuA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01002-BSU05820___gmuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01002-BSU05820___gmuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01002
# 2: BSU05820___gmuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 206/333 (61.9%)
# Similarity: 206/333 (61.9%)
# Gaps: 117/333 (35.1%)
# Score: 990.0
#
#
#=======================================
BSNT_01002 1 ATGGAACAGATGAAAATCACGAATTTAACAGACGAGCAAATCAGTTTTCA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05820___gm 1 ATGGAACAGATGAAAATCACGAATTTAACAGACGAGCAAATCAGTTTTCA 50
BSNT_01002 51 GCTTATCCTGCACAGTGGCAATGCCCGCAGCTGCATCATACAATCACTGC 100
|||.|||||||||||.||.|||||||||||||||||||||||||||||||
BSU05820___gm 51 GCTAATCCTGCACAGCGGAAATGCCCGCAGCTGCATCATACAATCACTGC 100
BSNT_01002 101 GCGCCTACAAAGAAGGGAACAAGGATGAGGCGGATGCCCTCATTGCCAAG 150
|||||||.|||||||||||.|||||.|||||.||||||||||||||||||
BSU05820___gm 101 GCGCCTATAAAGAAGGGAAAAAGGACGAGGCTGATGCCCTCATTGCCAAG 150
BSNT_01002 151 GCTGAGCAGGATTTATCCGCGGCCCATGACATTCACTTTCAAATGATACA 200
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU05820___gm 151 GCGGAGCAGGATTTATCCGCGGCCCATGACATTCACTTTCAAATGATACA 200
BSNT_01002 201 AAAGGAATCCGGCTGA---------------------------------- 216
.||||||||||||.||
BSU05820___gm 201 GAAGGAATCCGGCGGAGAAGCAACAGCTTTTTCATTGCTGCTTATGCATG 250
BSNT_01002 216 -------------------------------------------------- 216
BSU05820___gm 251 CAGAGGATCATCTGATGTCAACATTATCCATGAAAGAATTAGTGAAAGAG 300
BSNT_01002 216 --------------------------------- 216
BSU05820___gm 301 ATGCTTGATCTCTTTAAAACCAAGAATATATAA 333
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