Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01043 and BSU05990

See Amino acid alignment / Visit BSNT_01043 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:33
# Commandline: needle
#    -asequence dna-align/BSNT_01043___tatCY.1.22522.seq
#    -bsequence dna-align/BSU05990___tatCY.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01043___tatCY-BSU05990___tatCY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01043___tatCY-BSU05990___tatCY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01043___tatCY
# 2: BSU05990___tatCY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     741/765 (96.9%)
# Similarity:   741/765 (96.9%)
# Gaps:           9/765 ( 1.2%)
# Score: 3645.0
# 
#
#=======================================

BSNT_01043___      1 ---------ATGAAAGTGAATCAAATGTCGCTGCTGGAGCATATTGCTGA     41
                              |||||||||||||||||||||||||||||||||||||||||
BSU05990___ta      1 ATGACACGAATGAAAGTGAATCAAATGTCGCTGCTGGAGCATATTGCTGA     50

BSNT_01043___     42 GCTTCGAAAACGGTTGCTGATTGTAGCGCTGGCGTTTGTCGTTTTCTTTA     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta     51 GCTTCGAAAACGGTTGCTGATTGTAGCGCTGGCGTTTGTCGTTTTCTTTA    100

BSNT_01043___     92 TTGCTGGATTTTTTTTAGCAAAGCCGATTATTGTGTATCTGCAAGAAACA    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta    101 TTGCTGGATTTTTTTTAGCAAAGCCGATTATTGTGTATCTGCAAGAAACA    150

BSNT_01043___    142 GATGAAGCGAAGCAGCTTACGCTTAACGCGTTTAACCTGACAGACCCGCT    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta    151 GATGAAGCGAAGCAGCTTACGCTTAACGCGTTTAACCTGACAGACCCGCT    200

BSNT_01043___    192 TTATGTGTTTATGCAGTTTGCGTTTATCATCGGCATAGTCCTGACCTCGC    241
                     |||||||||||||||.||||||||||||||||||||||||.|||||||||
BSU05990___ta    201 TTATGTGTTTATGCAATTTGCGTTTATCATCGGCATAGTCTTGACCTCGC    250

BSNT_01043___    242 CAGTTATTCTTTATCAGCTTTGGGCTTTTGTGAGCCCGGGTCTCTATGAG    291
                     |.||||||||||||||||||||||||||||||||||||||.|||||||||
BSU05990___ta    251 CGGTTATTCTTTATCAGCTTTGGGCTTTTGTGAGCCCGGGCCTCTATGAG    300

BSNT_01043___    292 AAAGAGCGCAAAGTAACGCTCAGCTACATTCCGATCTCTATTTTGCTGTT    341
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU05990___ta    301 AAAGAGCGCAAAGTAACGCTCAGCTACATTCCGGTCTCTATTTTGCTGTT    350

BSNT_01043___    342 TTTAGCGGGCTTATCTTTTTCATATTATATTTTATTTCCTTTTGTTGTTG    391
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta    351 TTTAGCGGGCTTATCTTTTTCATATTATATTTTATTTCCTTTTGTTGTTG    400

BSNT_01043___    392 ATTTTATGAAGCGGATCTCTCAGGACTTGAATGTCAATCAGGTGATCGGA    441
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU05990___ta    401 ATTTTATGAAGCGGATTTCTCAGGACTTGAATGTCAATCAGGTGATCGGA    450

BSNT_01043___    442 ATTAATGAATATTTTCATTTTCTTCTGCAGCTGACGATTCCGTTTGGACT    491
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta    451 ATTAATGAATATTTTCATTTTCTTCTGCAGCTGACGATTCCGTTTGGACT    500

BSNT_01043___    492 GCTGTTCCAAATGCCGGTCATCCTTATGTTTTTGACCAGGCTCGGAATTG    541
                     ||||||||||||||||||||||||.|||||||||||.|||||||||||||
BSU05990___ta    501 GCTGTTCCAAATGCCGGTCATCCTCATGTTTTTGACAAGGCTCGGAATTG    550

BSNT_01043___    542 TGACACCGATGTTCTTGGCGAAAATCAGAAAGTATGCGTATTTTACGCTG    591
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta    551 TGACACCGATGTTCTTGGCGAAAATCAGAAAGTATGCGTATTTTACGCTG    600

BSNT_01043___    592 CTGGTGATCGCAGCCCTGATTACACCGCCTGAGCTTCTGTCCCATATGAT    641
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU05990___ta    601 CTGGTGATCGCAGCCCTGATTACACCGCCTGAGCTTCTGTCCCATATGAT    650

BSNT_01043___    642 GGTCACAGTCCCGCTTTTGATTTTATATGAAATCAGTATTCTGATATCGA    691
                     |||||||||||||||||||||||||||||||||||||||.||.|||||||
BSU05990___ta    651 GGTCACAGTCCCGCTTTTGATTTTATATGAAATCAGTATCCTTATATCGA    700

BSNT_01043___    692 AGGCCGCCTATCGGAAAGCGCAGAAAAGCAGTGCAGCCGATCAGGACGTG    741
                     |||||||.|||||||||||.||||||||||||||.|||||||.|||||||
BSU05990___ta    701 AGGCCGCTTATCGGAAAGCACAGAAAAGCAGTGCTGCCGATCGGGACGTG    750

BSNT_01043___    742 TCTTCTGTGCAATAA    756
                     |||||||.|||||||
BSU05990___ta    751 TCTTCTGGGCAATAA    765


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