Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01057 and BSU06170

See Amino acid alignment / Visit BSNT_01057 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:35
# Commandline: needle
#    -asequence dna-align/BSNT_01057___ydjE.1.22522.seq
#    -bsequence dna-align/BSU06170___ydjE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01057___ydjE-BSU06170___ydjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01057___ydjE-BSU06170___ydjE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01057___ydjE
# 2: BSU06170___ydjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 963
# Identity:     910/963 (94.5%)
# Similarity:   910/963 (94.5%)
# Gaps:          36/963 ( 3.7%)
# Score: 4482.0
# 
#
#=======================================

BSNT_01057___      1 ------------------------------------TTGATTGATTTCTT     14
                                                         ||||||||||||||
BSU06170___yd      1 ATGCGTAGTCATTCTGTAGTTTGTATTGGGGAATTGTTGATTGATTTCTT     50

BSNT_01057___     15 TTGTACCGATGTTGACGTTGATTTAATGGAAGGGCGCCATTTCCTGAAAA     64
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU06170___yd     51 TTGTACCGATGTTGACGTTGATTTAATGGAAGGGCGCCAATTCCTGAAAA    100

BSNT_01057___     65 GTGCCGGCGGGGCACCGGCGAATGTGTCGGCAGCGATTGCCAAGCTGGGA    114
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU06170___yd    101 GTGCCGGCGGGGCACCGGCGAATGTGTCGGCAGCGATTGCCAAGCTGGGC    150

BSNT_01057___    115 GGAGACGCCGCTTTCAGCGGAAAAGTAGGAAAGGATCCGTTTGGGTATTT    164
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    151 GGAGACGCCGCTTTCAGCGGAAAAGTAGGAAAGGATCCGTTTGGGTATTT    200

BSNT_01057___    165 TTTGAAGCGAACATTGGACGCTGTACATGTCGATACCTCTATGCTGGTGA    214
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    201 TCTGAAGCGAACATTGGACGCTGTACATGTCGATACCTCTATGCTGGTGA    250

BSNT_01057___    215 TGGATGAGAAAGCGCCTACAACGCTTGCTTTTGTTTCATTAAAACAAAAT    264
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    251 TGGATGAGAAAGCGCCTACAACGCTTGCTTTTGTTTCATTAAAACAAAAT    300

BSNT_01057___    265 GGAGAGCGTGACTTTGTTTTTAATAGAGGCGCGGACGCTTTGTTTACGCT    314
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    301 GGAGAGCGTGACTTTGTTTTTAATAGAGGCGCGGACGCTTTGTTTACGCT    350

BSNT_01057___    315 GGAGGATATTGACCAGGAAAAACTAAACGGAGCGAAAATCCTTCATTTCG    364
                     ||||||.||||||||||||||||||||||.||||||||||||||||||||
BSU06170___yd    351 GGAGGACATTGACCAGGAAAAACTAAACGAAGCGAAAATCCTTCATTTCG    400

BSNT_01057___    365 GCTCTGCGACGGCACTGTTATCAGATCCATTTTGCTCAGCCTATTTACGG    414
                     ||||||||||||||||||||||.|||||.|||||||||||||||||||||
BSU06170___yd    401 GCTCTGCGACGGCACTGTTATCGGATCCGTTTTGCTCAGCCTATTTACGG    450

BSNT_01057___    415 CTGATGTCGATTGCGAAAGACAATGGACAGTTTATTTCGTTTGACCCTAA    464
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    451 TTGATGTCGATTGCGAAAGACAATGGACAGTTTATTTCGTTTGACCCTAA    500

BSNT_01057___    465 CTACCGTGAAGATTTATGGAGGGGAAGAGTCTCAGAGTTTGTAAGTGTTG    514
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    501 CTACCGTGAAGATTTATGGAGGGGAAGAGTCTCAGAGTTTGTAAGTGTTG    550

BSNT_01057___    515 CGAAAAAAGCGATCGCTGTAAGTGATTTTGTGAAAGTCAGTGACGAGGAA    564
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    551 CGAAAAAAGCGATCGCTGTAAGTGATTTTGTGAAAGTCAGTGACGAGGAA    600

BSNT_01057___    565 CTTGAGATTATCAGCGGTGTGAAGGATCATGAAAAGGGTGTTGCGATCCT    614
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU06170___yd    601 CTTGAGATTATCAGCGGTGTGAAGGATCATGAAAAGGGAGTTGCGATCCT    650

BSNT_01057___    615 TCATGAGATCGGAGCCAACATTGTCGCTGTGACACTTGGGAAAAGCGGAA    664
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    651 TCATGAGATCGGAGCCAACATTGTCGCTGTGACACTTGGGAAAAGCGGAA    700

BSNT_01057___    665 CGCTTCTTTCCAATGGAAAAGACCGTGAAATCATTCCAAGCATTCCGGTG    714
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    701 CGCTTCTTTCCAATGGAAAAGACCGTGAAATCATTCCAAGCATTCCGGTG    750

BSNT_01057___    715 ACATCAATCGATTCAACAGGGGCGGGAGATGCTTTTGTCGGTGCGGCTTT    764
                     ||||||||.||.||||||||||||||||||||||||||||||||||||||
BSU06170___yd    751 ACATCAATTGACTCAACAGGGGCGGGAGATGCTTTTGTCGGTGCGGCTTT    800

BSNT_01057___    765 ATATCAATTGGCAAACACGGATCAGATTCAATCTGTAGAAGCAGATTTTG    814
                     |||||||||||||||||||||||||||||||||||||||.||.|||||||
BSU06170___yd    801 ATATCAATTGGCAAACACGGATCAGATTCAATCTGTAGATGCTGATTTTG    850

BSNT_01057___    815 TGAAACTGCGTGAGATTGTGGCGTTTGCCAATAAGGTCGGAGCTCTTGTG    864
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06170___yd    851 TGAAACTGCGTGAGATTGTGGCGTTTGCCAATAAGGTCGGAGCTCTTGTG    900

BSNT_01057___    865 TGCACTAAAATGGGAGCGATTGATGCACTGCCGAGCTTGGATGAGATCGA    914
                     |||||||||||.|||||||||||||||||||||||.|||||||||||.|.
BSU06170___yd    901 TGCACTAAAATTGGAGCGATTGATGCACTGCCGAGTTTGGATGAGATTGG    950

BSNT_01057___    915 AGTTTCTTTGTAA    927
                     |||||||||||||
BSU06170___yd    951 AGTTTCTTTGTAA    963


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