Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01064 and BSU06200

See Amino acid alignment / Visit BSNT_01064 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:35
# Commandline: needle
#    -asequence dna-align/BSNT_01064___ydjH.1.22522.seq
#    -bsequence dna-align/BSU06200___ydjH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01064___ydjH-BSU06200___ydjH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01064___ydjH-BSU06200___ydjH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01064___ydjH
# 2: BSU06200___ydjH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     747/765 (97.6%)
# Similarity:   747/765 (97.6%)
# Gaps:           0/765 ( 0.0%)
# Score: 3663.0
# 
#
#=======================================

BSNT_01064___      1 ATGCGGGGATTTTTAGGGAAAGCGATCTTTGTTGTGCTGGCTGTCTTCAT     50
                     |||||.||||||||.|||||||||||||||||||||||||||||.|||||
BSU06200___yd      1 ATGCGTGGATTTTTTGGGAAAGCGATCTTTGTTGTGCTGGCTGTTTTCAT     50

BSNT_01064___     51 TATGGTGCCTTTACTGGGGATCGAAGCGGCAAGAGCCTCTGAATCGCAGC    100
                     .|||.|||||||||||||.||||||||||.||||||||||||||.|||||
BSU06200___yd     51 CATGATGCCTTTACTGGGTATCGAAGCGGTAAGAGCCTCTGAATTGCAGC    100

BSNT_01064___    101 AGCATGTGTACGATCGCGCTCATCTATTGTCAAAAGCGGAGATCGGAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    101 AGCATGTGTACGATCGCGCTCATCTATTGTCAAAAGCGGAGATCGGAAAA    150

BSNT_01064___    151 CTTGAATCTCTCTCGGCAGAGTTGGGTGCAAAGAGAGACACTAATTTCAT    200
                     ||||||||||||||||||.||.|||||||||||||.||||||.|||||||
BSU06200___yd    151 CTTGAATCTCTCTCGGCAAAGCTGGGTGCAAAGAGGGACACTGATTTCAT    200

BSNT_01064___    201 CATTATTACGACCAAAAGCACAAACGGTGAAGATATTGCCGACTATACCG    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU06200___yd    201 CATTATTACGACCAAAAGCACAAACGGTGAAGATATTGCAGACTATACCG    250

BSNT_01064___    251 GCGATTTTTATGATCGTTACGGAAAAGGCAGTACAGCCATTTTGACCATT    300
                     |||||||||||||||||||||||||||||||||||||||||.||||.|||
BSU06200___yd    251 GCGATTTTTATGATCGTTACGGAAAAGGCAGTACAGCCATTCTGACGATT    300

BSNT_01064___    301 GATATGACAAACAGAGAAGTGTTTATCGCAGGCTTCAAAAAAGCCGAACA    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU06200___yd    301 GATATGACAAACAGAGAAGTGTTTATCGCAGGCTTTAAAAAAGCCGAACA    350

BSNT_01064___    351 GTATTTGGACAACAGCAGGCTCAATAGCATCAGAAATACGATTTCATCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    351 GTATTTGGACAACAGCAGGCTCAATAGCATCAGAAATACGATTTCATCTG    400

BSNT_01064___    401 ATTTATCCAATGAAAATTATTTTGAAGCTTTTGAGACATATATTCAGCTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    401 ATTTATCCAATGAAAATTATTTTGAAGCTTTTGAGACATATATTCAGCTT    450

BSNT_01064___    451 TCCTATAAAGATATGGGCATAAAACCGGGAGTAAACCCTGACAACATATT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    451 TCCTATAAAGATATGGGCATAAAACCGGGAGTAAACCCTGACAACATATT    500

BSNT_01064___    501 CTTTACATGGTGGTTTCAGCTGATTGCTGCCATCGCAGTCGGGGGAATTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    501 CTTTACATGGTGGTTTCAGCTGATTGCTGCCATCGCAGTCGGGGGAATTG    550

BSNT_01064___    551 CGGTTTCAATCATGCTTTATCATGCAGGCGGCAAAGTAACGGTTAATGGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    551 CGGTTTCAATCATGCTTTATCATGCAGGCGGCAAAGTAACGGTTAATGGA    600

BSNT_01064___    601 AATACATATATGGATCAGCGTACGTCTGATGTGATTGATCAATACGACAC    650
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    601 AGTACATATATGGATCAGCGTACGTCTGATGTGATTGATCAATACGACAC    650

BSNT_01064___    651 TTATATTAGAACGACTGTAACAAGAGAAAGAAAACCATCAGATAAAGACA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06200___yd    651 TTATATTAGAACGACTGTAACAAGAGAAAGAAAACCATCAGATAAAGACA    700

BSNT_01064___    701 GCGGCAGCGATGGCGGTGTTACGAAAGGCGGCACGTCATACAGTGGAAGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU06200___yd    701 GCGGCAGCGATGGCGGTGTTACGAAAGGCGGCACGTCATACAGTGGGAGC    750

BSNT_01064___    751 CGGGGCAGTTTTTAA    765
                     |||||||||||||||
BSU06200___yd    751 CGGGGCAGTTTTTAA    765


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.