Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01065 and BSU06210

See Amino acid alignment / Visit BSNT_01065 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:35
# Commandline: needle
#    -asequence dna-align/BSNT_01065___ydjI.1.22522.seq
#    -bsequence dna-align/BSU06210___ydjI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01065___ydjI-BSU06210___ydjI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01065___ydjI-BSU06210___ydjI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01065___ydjI
# 2: BSU06210___ydjI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 972
# Identity:     966/972 (99.4%)
# Similarity:   966/972 (99.4%)
# Gaps:           0/972 ( 0.0%)
# Score: 4806.0
# 
#
#=======================================

BSNT_01065___      1 ATGTCGTTTTTCAGAAATCAATTAGCGAATGTAGTAGAGTGGGAAGAATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd      1 ATGTCGTTTTTCAGAAATCAATTAGCGAATGTAGTAGAGTGGGAAGAATT     50

BSNT_01065___     51 TAGAGATGATATGATTTTTTATAAATGGAACAATCGTGAAATCAAAAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd     51 TAGAGATGATATGATTTTTTATAAATGGAACAATCGTGAAATCAAAAAAG    100

BSNT_01065___    101 GGAGCCGTTTAATCATTCGTCCCGGACAGGATGCTGTCTTTTTGAACAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    101 GGAGCCGTTTAATCATTCGTCCCGGACAGGATGCTGTCTTTTTGAACAAT    150

BSNT_01065___    151 GGGCGGGTTGAAGGAGTCTTTCAAGATGATGGCGATTATGATATTGAATC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    151 GGGCGGGTTGAAGGAGTCTTTCAAGATGATGGCGATTATGATATTGAATC    200

BSNT_01065___    201 AGAAATTATTCCATTCCTTTCAACGTTAAAGGGCTTTAAGTTTGGCTTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    201 AGAAATTATTCCATTCCTTTCAACGTTAAAGGGCTTTAAGTTTGGCTTTA    250

BSNT_01065___    251 ACAGCGGCATGCGAGCTGAGGTGCTGTTTGTCAATACGAAGGAATTTACC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    251 ACAGCGGCATGCGAGCTGAGGTGCTGTTTGTCAATACGAAGGAATTTACC    300

BSNT_01065___    301 GTAAGATGGGGAACAAAACAGGCGATAAATATTCCGGCAGCGGGAATGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    301 GTAAGATGGGGAACAAAACAGGCGATAAATATTCCGGCAGCGGGAATGCC    350

BSNT_01065___    351 AGGCGGGATGCCCATTCGCGCAAACGGCACATTTAATTTCAAGGTGCAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    351 AGGCGGGATGCCCATTCGCGCAAACGGCACATTTAATTTCAAGGTGCAGG    400

BSNT_01065___    401 ACTATATCAGCCTGATTGATAAAATCGCTGGCGTGAAAGATCAATATTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    401 ACTATATCAGCCTGATTGATAAAATCGCTGGCGTGAAAGATCAATATTTT    450

BSNT_01065___    451 GTAGAGGATATTAAAACCCGTATCATTTCTATTCTGGATCAGCTTCTCAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    451 GTAGAGGATATTAAAACCCGTATCATTTCTATTCTGGATCAGCTTCTCAT    500

BSNT_01065___    501 GAAGTGGATCACAAGAGAAGGGAAAGATATGTTTAATCTTCAAGCAAACG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    501 GAAGTGGATCACAAGAGAAGGGAAAGATATGTTTAATCTTCAAGCAAACG    550

BSNT_01065___    551 CTTTTGATATTGCCAAGGGAATTCAAGAGGACTTAGATATGCGCTTAATA    600
                     ||||||||||||||||||||||||||||||||||||||||||..||||||
BSU06210___yd    551 CTTTTGATATTGCCAAGGGAATTCAAGAGGACTTAGATATGCAATTAATA    600

BSNT_01065___    601 AGCGACGGGATGACAGTCACTGGTTTTCAAATCATGAGCTTTAATTATCC    650
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU06210___yd    601 AGCGACGGGATGACGGTCACTGGTTTTCAAATCATGAGCTTTAATTATCC    650

BSNT_01065___    651 TCAAGAGGTTCAAGAAATGATTACAAAGAACGCTTCCTACGGTATGGTTG    700
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU06210___yd    651 TCAAGAGGTTCAAGATATGATTACAAAGAACGCTTCCTACGGTATGGTTG    700

BSNT_01065___    701 GGGATGTGAACAGATACCAGCAAATATCAATGACGGATGGAATGGCATCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    701 GGGATGTGAACAGATACCAGCAAATATCAATGACGGATGGAATGGCATCC    750

BSNT_01065___    751 GGAAAGATGAGCGGAGGCGGAGCGGCTTCGGATATGGCTGGAATGATGAT    800
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU06210___yd    751 GGAAAGATGAGCGGAAGCGGAGCGGCTTCGGATATGGCTGGAATGATGAT    800

BSNT_01065___    801 GGGAATGAATATGGCCAATCAGATGATGAACCAAATGAATCAAAATCAGC    850
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU06210___yd    801 GGGAATGAATATGGCCAATCAGATGATGAACCAAATGAATCAGAATCAGC    850

BSNT_01065___    851 AGGCACAGTCATCAGGCCCACAGTCAACTGGCAGCGGAAGCAAACCGAAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    851 AGGCACAGTCATCAGGCCCACAGTCAACTGGCAGCGGAAGCAAACCGAAT    900

BSNT_01065___    901 TTCTGTCCAAACTGCGGAACAAAAACGGGCGAAGCCAATTTTTGTCCGAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06210___yd    901 TTCTGTCCAAACTGCGGAACAAAAACGGGCGAAGCCAATTTTTGTCCGAA    950

BSNT_01065___    951 TTGCGGCCAGAAGCTTGTATAA    972
                     ||||||||||||||||||||||
BSU06210___yd    951 TTGCGGCCAGAAGCTTGTATAA    972


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01065 and BSU06210

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
