Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01073 and BSU06260

See Amino acid alignment / Visit BSNT_01073 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:36
# Commandline: needle
#    -asequence dna-align/BSNT_01073___ydjN.1.22522.seq
#    -bsequence dna-align/BSU06260___ydjN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01073___ydjN-BSU06260___ydjN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01073___ydjN-BSU06260___ydjN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01073___ydjN
# 2: BSU06260___ydjN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1047
# Identity:    1032/1047 (98.6%)
# Similarity:  1032/1047 (98.6%)
# Gaps:           0/1047 ( 0.0%)
# Score: 5100.0
# 
#
#=======================================

BSNT_01073___      1 ATGAAAAAAAGAATCATATTATTATTAGCAGTGATAATAGCGGCAGCTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd      1 ATGAAAAAAAGAATCATATTATTATTAGCAGTGATAATAGCGGCAGCTGC     50

BSNT_01073___     51 CGCGGGGGTTGCGTTTTATGTTGCAAAGGATAAAGGCCATGAGAAGGCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd     51 CGCGGGGGTTGCGTTTTATGTTGCAAAGGATAAAGGCCATGAGAAGGCTG    100

BSNT_01073___    101 CTGATGTTTCAGTCAATACCGAAAGCGGTGATGAGCTGCTGGTTTCAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    101 CTGATGTTTCAGTCAATACCGAAAGCGGTGATGAGCTGCTGGTTTCAATT    150

BSNT_01073___    151 ACAGATACGGATCTGCTGACAAAGTATTATGAAAATGACAAGGTGATCCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    151 ACAGATACGGATCTGCTGACAAAGTATTATGAAAATGACAAGGTGATCCA    200

BSNT_01073___    201 TGAGGAGAAGCTGACCAGCTATCCGGCATTTGCCTTGGATCAAAAACAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    201 TGAGGAGAAGCTGACCAGCTATCCGGCATTTGCCTTGGATCAAAAACAGC    250

BSNT_01073___    251 AGGTGCTCTATTATACGGGCAATAATGAACAGAATGAAATGAGGCTTTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    251 AGGTGCTCTATTATACGGGCAATAATGAACAGAATGAAATGAGGCTTTTT    300

BSNT_01073___    301 AAACTGGATCTAAAGTCTAATAAAAAGACGGTGCTTTATAAAGGCGCGGA    350
                     |||.|||||||.||||||.|||||||.|||.|||||||||||||||||||
BSU06260___yd    301 AAATTGGATCTGAAGTCTCATAAAAAAACGATGCTTTATAAAGGCGCGGA    350

BSNT_01073___    351 GAGTGCGGACAGTTTGTTTTTATCAAAGGACCGTTCAACCATCTATTTCC    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU06260___yd    351 GAGTGCGGACAGTTTATTTTTATCAAAGGACCGTTCAACCATCTATTTCC    400

BSNT_01073___    401 GCTTAGGAAAATCGGACGAAAGCAATTTTCGGATCGCCGCTTTTGATCTG    450
                     |||||||||||.|||||||||||||||||||.||||||||||||||||||
BSU06260___yd    401 GCTTAGGAAAAGCGGACGAAAGCAATTTTCGAATCGCCGCTTTTGATCTG    450

BSNT_01073___    451 AAGACGAAAAAGTATAAAAATCTTTATCCTGCCGCTAATGATCAGGATGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    451 AAGACGAAAAAGTATAAAAATCTTTATCCTGCCGCTAATGATCAGGATGA    500

BSNT_01073___    501 CACCGTCAGCAGCTTCTTTTATAACCAAAAAAACGATTCATTTGCATTGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    501 CACCGTCAGCAGCTTCTTTTATAACCAAAAAAACGATTCATTTGCATTGC    550

BSNT_01073___    551 TTCATTATTCTGTAGAAGAAGACTACAAGAAAACAGATGAAGCAAACGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    551 TTCATTATTCTGTAGAAGAAGACTACAAGAAAACAGATGAAGCAAACGAA    600

BSNT_01073___    601 AAGGGCATCGACCCTGAACCGACAACGATTCATTTTGCGGAAGGCCGTCA    650
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU06260___yd    601 AAGGGCATCGACCCTGAACCGACAACGATTCATTTTGCGGAAGGCCGCCA    650

BSNT_01073___    651 ACATAAATTTAATGAGCTGAAAAGCCTGAACCAATTTATCAGCGATATTG    700
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    651 AAATAAATTTAATGAGCTGAAAAGCCTGAACCAATTTATCAGCGATATTG    700

BSNT_01073___    701 CTGTTTCTGATGATGATAAACGTATTTTATTCACATCATATACGCAGAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU06260___yd    701 CTGTTTCTGATGATGATAAACGTATTTTATTCACATCATATACGCAAAAA    750

BSNT_01073___    751 GGAACGGAGCAAACCGCTTCTATTCAGATGCTCAATGCGGATACGAAAAA    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU06260___yd    751 GGAACGGAGCAAACCGCTTCTATTCAAATGCTCAATGCGGATACGAAAAA    800

BSNT_01073___    801 GTATGAAAGCATCATCTCAAATCAAAAATCATTTAAGCTGTTAATTGACG    850
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    801 ATATGAAAGCATCATCTCAAATCAAAAATCATTTAAGCTGTTAATTGACG    850

BSNT_01073___    851 CACAGCCTCAGTTTTCTAAGGATGGGAAGAACATTTATTTTCTTGCCGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    851 CACAGCCTCAGTTTTCTAAGGATGGGAAGAACATTTATTTTCTTGCCGAA    900

BSNT_01073___    901 GCCAAGGGGGCTAAAAAGCTGAAGGACGAAACAGGGCGTGAAGCTAAGGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06260___yd    901 GCCAAGGGGGCTAAAAAGCTGAAGGACGAAACAGGGCGTGAAGCTAAGGT    950

BSNT_01073___    951 GCGGACGATTTATTCCTATAGCCTTGAAAATAAGACCTTCAAAAAAGTAT   1000
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU06260___yd    951 GCGGACGATTTATTCCTATAGCCTTGAGAATAAGACCTTCAAAAAAGTAT   1000

BSNT_01073___   1001 GGGAAAATCCGAACGGCATCATCAACAGCTTTTCTGTGATTAACTAA   1047
                     |||||||||||||||||||||||||||||||||.|||||||||||||
BSU06260___yd   1001 GGGAAAATCCGAACGGCATCATCAACAGCTTTTTTGTGATTAACTAA   1047


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01073 and BSU06260

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
