Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01124 and BSU06560

See Amino acid alignment / Visit BSNT_01124 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:43
# Commandline: needle
#    -asequence dna-align/BSNT_01124___yerA.1.22522.seq
#    -bsequence dna-align/BSU06560___yerA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01124___yerA-BSU06560___yerA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01124___yerA-BSU06560___yerA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01124___yerA
# 2: BSU06560___yerA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1743
# Identity:    1728/1743 (99.1%)
# Similarity:  1728/1743 (99.1%)
# Gaps:           0/1743 ( 0.0%)
# Score: 8580.0
# 
#
#=======================================

BSNT_01124___      1 ATGTCCGAACGCACCTTTAACTGGAAAAACAAAGACATCAGGGCACAGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye      1 ATGTCCGAACGCACCTTTAACTGGAAAAACAAAGACATCAGGGCACAGGT     50

BSNT_01124___     51 TGATGTTGTAGACTCAAAGCTGCTTCCAACGCTCCTTTTACGGAATGCTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye     51 TGATGTTGTAGACTCAAAGCTGCTTCCAACGCTCCTTTTACGGAATGCTC    100

BSNT_01124___    101 TCGTCTTAAATCCATATGTAAAACAATGGCTGAAAAAAAACATTTGGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    101 TCGTCTTAAATCCATATGTAAAACAATGGCTGAAAAAAAACATTTGGATT    150

BSNT_01124___    151 TATCAGGACCGCATTGTTTATGTGGGTCATGAACTTCCGAATAGAGCCGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    151 TATCAGGACCGCATTGTTTATGTGGGTCATGAACTTCCGAATAGAGCCGA    200

BSNT_01124___    201 AGAAATTCATACGATTGATTGTGAAGGAAAATACATTGTGCCAGGTTATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    201 AGAAATTCATACGATTGATTGTGAAGGAAAATACATTGTGCCAGGTTATA    250

BSNT_01124___    251 TTGAACCGCACGCACATCCTTTTCAAATATATAATCCCCAAACACTGGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    251 TTGAACCGCACGCACATCCTTTTCAAATATATAATCCCCAAACACTGGCG    300

BSNT_01124___    301 GAATATGTGTCTCAATACGGAACAACGACATTTGTGAATGATAACTTATT    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU06560___ye    301 GAATATGTGTCTCAATACGGAACAACGACATTCGTGAATGATAACTTATT    350

BSNT_01124___    351 TTTGCTTTTGCAAAGCGGAAAAAAGAAAGCGCTTACGATTTTGAATGAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    351 TTTGCTTTTGCAAAGCGGAAAAAAGAAAGCGCTTACGATTTTGAATGAAC    400

BSNT_01124___    401 TCAAAAAGCAGCCTGTCCAGTATTTTTGGTGGTCACGCTATGACCTCCAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    401 TCAAAAAGCAGCCTGTCCAGTATTTTTGGTGGTCACGCTATGACCTCCAG    450

BSNT_01124___    451 ACCGAGGTTCTGAACGAGGACCACGTCCTTCCATTTGACGTCAGAAAACA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    451 ACCGAGGTTCTGAACGAGGACCACGTCCTTCCATTTGACGTCAGAAAACA    500

BSNT_01124___    501 GTGGATTGAACATCCGGATGTGATTCAAGGCGGAGAAATGACCGGATGGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    501 GTGGATTGAACATCCGGATGTGATTCAAGGCGGAGAAATGACCGGATGGC    550

BSNT_01124___    551 CTCGCCTGGTAGATGGTGATGATTTAATGCTCCACTGCATGCAAGCTACA    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU06560___ye    551 CTCGCCTGGTAGATGGTGATGATTTAATGCTCCACTGTATGCAAGCTACA    600

BSNT_01124___    601 AAGAAACAGCGAAAACGCATTGAAGGGCATTTTCCCGGCGCATCTGATAA    650
                     |||||||||.|||||||.|||||||||||||||||||||||.||||||||
BSU06560___ye    601 AAGAAACAGAGAAAACGTATTGAAGGGCATTTTCCCGGCGCTTCTGATAA    650

BSNT_01124___    651 AACGCTTACAAAAATGAAGCTGTTCGGTGCGGATTGTGATCATGAAGCGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    651 AACGCTTACAAAAATGAAGCTGTTCGGTGCGGATTGTGATCATGAAGCGA    700

BSNT_01124___    701 TGACAGGTGATGAAGTGATGAGAAGGCTGGAACTGGGCTATTATGTTTCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    701 TGACAGGTGATGAAGTGATGAGAAGGCTGGAACTGGGCTATTATGTTTCC    750

BSNT_01124___    751 CTTCGGAACTCTTCCATTCGCCCCGATGTAAGAAAAATCTTGCAAGAGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    751 CTTCGGAACTCTTCCATTCGCCCCGATGTAAGAAAAATCTTGCAAGAGCT    800

BSNT_01124___    801 GCATGAGAAGGGCTTCCGCTATTATGACCACTTCTTTTACACGACAGATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    801 GCATGAGAAGGGCTTCCGCTATTATGACCACTTCTTTTACACGACAGATG    850

BSNT_01124___    851 GCGCAACCCCGAATTTCTATAAAGGCGGCATGACAAACGAGCTGATTCGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    851 GCGCAACCCCGAATTTCTATAAAGGCGGCATGACAAACGAGCTGATTCGC    900

BSNT_01124___    901 ATTGCGTTAGAAGAAGGCGTACCTGCAATCGACGCCTACAATATGGCATC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    901 ATTGCGTTAGAAGAAGGCGTACCTGCAATCGACGCCTACAATATGGCATC    950

BSNT_01124___    951 ATTTAATATCGCAAAGTATTACCAAATGGATGATTATTTAGGAGTTGTCG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye    951 ATTTAATATCGCAAAGTATTACCAAATGGATGATTATTTAGGAGTTGTCG   1000

BSNT_01124___   1001 GACCGGGCAGACTGGCATCGCTCAACATACTGGAAGCTCCGTTAAATCCG   1050
                     ||||||||||||||||||||||.|||||||||||||.|||||||||||||
BSU06560___ye   1001 GACCGGGCAGACTGGCATCGCTAAACATACTGGAAGATCCGTTAAATCCG   1050

BSNT_01124___   1051 AATCCCGTGACTGTTCTGTCAAAAGGGACCATTCTGCGTGAAGACGGCTG   1100
                     |||||.||||||||||||||||||||||||||||||||||||.|||||||
BSU06560___ye   1051 AATCCAGTGACTGTTCTGTCAAAAGGGACCATTCTGCGTGAAAACGGCTG   1100

BSNT_01124___   1101 TGATTTGAAGGCGTTTACAAAGACGGACTGGCACAAAGGCGGTCTTGTCT   1150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU06560___ye   1101 TGATTTGAAGGCGTTTACAAAGACGGACTGGCACAAAGGCGGTCTTGTCC   1150

BSNT_01124___   1151 CGCTTGAACTTTCATATGATATGACGATGGATGACTTGCAGTTTTCTATG   1200
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1151 CGCTTGAGCTTTCATATGATATGACGATGGATGACTTGCAGTTTTCTATG   1200

BSNT_01124___   1201 CCGATGGGCGTGAAAATGCGGAATGCGGTTATTATGGAGCCCTATATGAT   1250
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU06560___ye   1201 CCGATGGGCGTGAAAATGCGGAATGCGGTTATTATGGAGCCATATATGAT   1250

BSNT_01124___   1251 TGAGATTGACAATTCGATGGAACAGCTCTCGTTTGACCATGATGAAAGTT   1300
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1251 TGAGATCGACAATTCGATGGAACAGCTCTCGTTTGACCATGATGAAAGTT   1300

BSNT_01124___   1301 ATTTGACGATGCTCGACAGACACGGGAAATGGCGCGTCAATACGATGATA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1301 ATTTGACGATGCTCGACAGACACGGGAAATGGCGCGTCAATACGATGATA   1350

BSNT_01124___   1351 AAAGGGTTTGCCTCAAGCGTGCAGGGATTTGTAAGCTCCTTTACGACGAC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1351 AAAGGGTTTGCCTCAAGCGTGCAGGGATTTGTAAGCTCCTTTACGACGAC   1400

BSNT_01124___   1401 GGGCGACATTGTCGCGATTGGAAAAAATAAAGCGGATATGCTGCTCGCTT   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1401 GGGCGACATTGTCGCGATTGGAAAAAATAAAGCGGATATGCTGCTCGCTT   1450

BSNT_01124___   1451 TCGCCCGCATGAAAGAAATCGGAGGAGGAATTGTTTTAGCGGAGAACAGA   1500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU06560___ye   1451 TCGCCCGCATGAAAGAAATCGGAGGAGGAATTGTTTTAGCGGAGAACGGA   1500

BSNT_01124___   1501 AACATTCTGCATGAAATCCCGCTTGCGCTGTGCGGCTGCGCCTCTTCGGA   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1501 AACATTCTGCATGAAATCCCGCTTGCGCTGTGCGGCTGCGCCTCTTCGGA   1550

BSNT_01124___   1551 AGCGTATGAAGACGTGCTTGAGAAGGAACAAAAGCTGAGAGATCTTTTGA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1551 AGCGTATGAAGACGTGCTTGAGAAGGAACAAAAGCTGAGAGATCTTTTGA   1600

BSNT_01124___   1601 CTGAAAGAGGCTATGAGTTTTGCGATCCTATCTATACGCTGCTCTTTTTG   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1601 CTGAAAGAGGCTATGAGTTTTGCGATCCTATCTATACGCTGCTCTTTTTG   1650

BSNT_01124___   1651 CAAAGTACGCACCTTCCGTATATACGCATTACGCCAAGAGGAATCTTCGA   1700
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU06560___ye   1651 CAAAGTACGCACCTTCCGTATATACGCATTACGCCAAGAGGAATATTCGA   1700

BSNT_01124___   1701 CGTCATGAAAAAAACTGTACTCTTTCCATCGATAATGCGTTAA   1743
                     |||||||||||||||||||||||||||||||||||||||||||
BSU06560___ye   1701 CGTCATGAAAAAAACTGTACTCTTTCCATCGATAATGCGTTAA   1743


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