Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01135 and BSU06630

See Amino acid alignment / Visit BSNT_01135 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:45
# Commandline: needle
#    -asequence dna-align/BSNT_01135___yerH.1.22522.seq
#    -bsequence dna-align/BSU06630___yerH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01135___yerH-BSU06630___yerH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01135___yerH-BSU06630___yerH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01135___yerH
# 2: BSU06630___yerH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1191
# Identity:    1171/1191 (98.3%)
# Similarity:  1171/1191 (98.3%)
# Gaps:           0/1191 ( 0.0%)
# Score: 5775.0
# 
#
#=======================================

BSNT_01135___      1 TTGAAAAAGACGTTGGCATTGGCGGCAACGGCGGCAGTATTAATGCTGTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye      1 TTGAAAAAGACGTTGGCATTGGCGGCAACGGCGGCAGTATTAATGCTGTC     50

BSNT_01135___     51 TGCCTGCTCGTCAGGTTTTGGGGGGGAGAAGGAGGAAGAGATTACGCAAA    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU06630___ye     51 TGCCTGCTCGTCAGGTTTCGGGGGGGAGAAGGAGGAAGAGATTACGCAAA    100

BSNT_01135___    101 AGACGGCGAAATCGTCAGAAAAAGCGATTGTCCCGAAATATAATATCTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    101 AGACGGCGAAATCGTCAGAAAAAGCGATTGTCCCGAAATATAATATCTCT    150

BSNT_01135___    151 GACTCCTATTACAAAATGGTGCTGCCGTTTAAGGCAGGCAAAGCGCGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    151 GACTCCTATTACAAAATGGTGCTGCCGTTTAAGGCAGGCAAAGCGCGCGG    200

BSNT_01135___    201 CTTAACAACGGAACAGCTGAATACTAGGCTGGACATTGACGAGTTTGAAA    250
                     ||||||||||||||||||||||||.|||||||||||||||||.|||||||
BSU06630___ye    201 CTTAACAACGGAACAGCTGAATACAAGGCTGGACATTGACGAATTTGAAA    250

BSNT_01135___    251 CAGGGCTGATGCGTCTTGCCCAAGATTCTTTCTCGACTGACGATTATCTG    300
                     |||||||||||||.||||||||||||||||||||.|||||||||||||||
BSU06630___ye    251 CAGGGCTGATGCGCCTTGCCCAAGATTCTTTCTCAACTGACGATTATCTG    300

BSNT_01135___    301 TTCCAAGAAGGACAATATTTAGATGAGGATACAGTATTAAGCTGGCTGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    301 TTCCAAGAAGGACAATATTTAGATGAGGATACAGTATTAAGCTGGCTGGC    350

BSNT_01135___    351 ACGGAAAAAAACGGGCTCTGATTTGAAAAAAGCCGAAAAAGAAGATAAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU06630___ye    351 ACGGAAAAAAACGGGCTCTGATTTGAAAAAAGCCGAAAAAGAAGATAAGA    400

BSNT_01135___    401 ACTTCAAAAATGAAGGCTTGAACCCGGCGCTCCCGAGCTCTGGTTCAACA    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU06630___ye    401 ACTTCAAAAATGAAGGCTTGAACCCGGCGCTCCCGAGTTCTGGTTCAACA    450

BSNT_01135___    451 GAAGAAAAGAACGAAAGCAGCCCGATTTATTTAGCATCCATGCTTGAGCA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU06630___ye    451 GAAGAAAAGAACGAAAGCAGCCCAATTTATTTAGCATCCATGCTTGAGCA    500

BSNT_01135___    501 TGATTATTTAGTCAGAAAAGATAAGAATTCTATCCAGCTTGGCGGCGTCA    550
                     .||||||||||||||||||||.||||||||||||||||||||||||||||
BSU06630___ye    501 CGATTATTTAGTCAGAAAAGACAAGAATTCTATCCAGCTTGGCGGCGTCA    550

BSNT_01135___    551 TGATCGGACTGGCGTTAAACTCCGTGTATTACTATCGTGAAAAAACTGGC    600
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU06630___ye    551 TGATCGGACTGGCGTTAAACTCAGTGTATTACTATCGTGAAAAAACTGGC    600

BSNT_01135___    601 GACCCGCAAAAAGAAGTGGAGATTAAGGACAGCACGCTCCGCCAGCAGGG    650
                     ||||||||||||||||||||||||||.|||||||||||.|||||||||||
BSU06630___ye    601 GACCCGCAAAAAGAAGTGGAGATTAAAGACAGCACGCTTCGCCAGCAGGG    650

BSNT_01135___    651 AGAAAAAATTGCACAGGAGGTTATTAACCGCCTCCGCAAAAAAGATAACT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    651 AGAAAAAATTGCACAGGAGGTTATTAACCGCCTCCGCAAAAAAGATAACT    700

BSNT_01135___    701 TGAAGAATGTGCCGATTACCGTCGCGCTCTACAAGCAGGCGTCAAAAACA    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU06630___ye    701 TGAAGAATGTGCCGATTACCGTGGCGCTCTACAAGCAGGCGTCAAAAACA    750

BSNT_01135___    751 TCGATTGTGCCGGGGAACTTCATCGCCAAAACAGAGGTCAAAGCAGGCTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    751 TCGATTGTGCCGGGGAACTTCATCGCCAAAACAGAGGTCAAAGCAGGCTC    800

BSNT_01135___    801 TACTGATATCTCAAATTGGGATGACATCAATGAAAAATATGTATTCTATC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    801 TACTGATATCTCAAATTGGGATGACATCAATGAAAAATATGTATTCTATC    850

BSNT_01135___    851 CGGCAGATACAACCACAGCAGAAAAATACCCGGATGACACCGAGGTCTTT    900
                     ||||.||||||||||||||||||||.||||||||||||||||||||||||
BSU06630___ye    851 CGGCGGATACAACCACAGCAGAAAAGTACCCGGATGACACCGAGGTCTTT    900

BSNT_01135___    901 AAGCGGTTCAAAAACTCAATTGAAGAATATTTCCCGAACTATACAGGCGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    901 AAGCGGTTCAAAAACTCAATTGAAGAATATTTCCCGAACTATACAGGCGT    950

BSNT_01135___    951 TGTCGGTACAGCGCTGTATGAAAATGATGAAATGAAGAAAATGAAGATTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06630___ye    951 TGTCGGTACAGCGCTGTATGAAAATGATGAAATGAAGAAAATGAAGATTG   1000

BSNT_01135___   1001 ACATACCAATGCAATTCTATGGAAAAAGTGAAGTTGTCGCGTTTACCCAG   1050
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU06630___ye   1001 ACATACCAATGCAATTCTACGGAAAAAGTGAAGTTGTCGCGTTTACCCAG   1050

BSNT_01135___   1051 TTCTTAACGGGTGAAGTGATGGACTACTACTCTAAAGGCTCAGTTGATGT   1100
                     |||||||||||||||||||||||||||||||||||..|||||||||||||
BSU06630___ye   1051 TTCTTAACGGGTGAAGTGATGGACTACTACTCTAAGAGCTCAGTTGATGT   1100

BSNT_01135___   1101 CGAAGTCAATATCACGTCCTCAGACGGACAGGAAGCGGTTATTATCCGCA   1150
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU06630___ye   1101 CGAAGTCAATATCACGTCCTCAGACGGACAGGAAGCGGTCATTATCCGCA   1150

BSNT_01135___   1151 ATGCCGGAGATAAAGAGCCGACTGTTCACATTTATGACTGA   1191
                     |||||||||||||||||||||||||||||||||||||||||
BSU06630___ye   1151 ATGCCGGAGATAAAGAGCCGACTGTTCACATTTATGACTGA   1191


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