Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01159 and BSU06812

See Amino acid alignment / Visit BSNT_01159 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:49
# Commandline: needle
#    -asequence dna-align/BSNT_01159.1.22522.seq
#    -bsequence dna-align/BSU06812___yeeF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01159-BSU06812___yeeF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01159-BSU06812___yeeF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01159
# 2: BSU06812___yeeF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2022
# Identity:    1882/2022 (93.1%)
# Similarity:  1882/2022 (93.1%)
# Gaps:          24/2022 ( 1.2%)
# Score: 8858.0
# 
#
#=======================================

BSNT_01159         1 ATGAAAGTATTTGAAGCGAAAACACTACTTTCAGAAGCGGCAGACCGTGC     50
                     ||||||||||||||||||||||||||.|||||.||||||.||||||||||
BSU06812___ye      1 ATGAAAGTATTTGAAGCGAAAACACTGCTTTCGGAAGCGACAGACCGTGC     50

BSNT_01159        51 AAAAGAGTACAAAGAACTAAGAACGCAAATGGTCAACTTGAGAAAAGCGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye     51 AAAAGAGTACAAAGAACTAAGAACGCAAATGGTCAACTTGAGAAAAGCGT    100

BSNT_01159       101 TAAAAAGCGTCGCTGATCTCAGTGACAGTGAATTCTCAGGTAAAGGCGCT    150
                     |||||.|.||||||||||||||||||||||||||||||||.||||||||.
BSU06812___ye    101 TAAAAGGAGTCGCTGATCTCAGTGACAGTGAATTCTCAGGAAAAGGCGCC    150

BSNT_01159       151 AGCAATATCAAAGCCTTCTACCACGACCACGTCGGCGTCACCGACCAATG    200
                     |||||.|||||.||.|||||.||||||||||||||||||.|||||||.||
BSU06812___ye    151 AGCAACATCAAGGCATTCTATCACGACCACGTCGGCGTCGCCGACCAGTG    200

BSNT_01159       201 GATCGACTACATCGACATGAAAATCGCATTTTTCAACAGTATCGCCGGAG    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU06812___ye    201 GATCGACTACATCGACATGAAAATCGCATTTTTCAACAGCATCGCCGGAG    250

BSNT_01159       251 CCGCCGAAGACAAAGGCCTCTCAGACGCATACATCGAAGAATCCTTCCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye    251 CCGCCGAAGACAAAGGCCTCTCAGACGCATACATCGAAGAATCCTTCCTG    300

BSNT_01159       301 GAGCACGAACTGGCAAATGCCAATAAAAAATCAAAATCCATCATGTCCGA    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU06812___ye    301 GAGCACGAACTGGCAAATGCCAATAAAAAATCTAAATCCATCATGTCCGA    350

BSNT_01159       351 ACAGAAAAAAGCGATGAAAGACATCCTGAACGATATCGACGACATCCTCC    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU06812___ye    351 ACAGAAAAAAGCGATGAAAGACATCCTAAACGATATCGACGACATCCTCC    400

BSNT_01159       401 CGCTCGACCTGTTTTCAACAGAAACCTTCAAAGACGAGCTGGCCGATGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye    401 CGCTCGACCTGTTTTCAACAGAAACCTTCAAAGACGAGCTGGCCGATGCC    450

BSNT_01159       451 AACGACAAACGCAAAAAAACACTGGATAAATTGGACGCCTTGGACGAAGA    500
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU06812___ye    451 AACGACAAACGCAAAAAAACACTGGAAAAATTGGACGCCTTGGACGAAGA    500

BSNT_01159       501 CCTGAAAACAGAATACGCCCTGTCAGAACCAAACGAACAATTCATCAAAT    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU06812___ye    501 CCTGAAAACAGAATACGCCCTGTCTGAACCAAACGAACAATTCATCAAAT    550

BSNT_01159       551 CCGACTTCCAAAAGCTCCAAGAAGCAACTGGCAAAGGCAAAAACGCTACG    600
                     ||||||||||||||||||||||||||||.||.||||||||||||||.||.
BSU06812___ye    551 CCGACTTCCAAAAGCTCCAAGAAGCAACGGGTAAAGGCAAAAACGCCACA    600

BSNT_01159       601 CCCATCCACTACAACGCCAAGGCGTACCGTGACAGTGACATACATAAGAA    650
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU06812___ye    601 CCCATCCACTACAACGCCAAGGCGTACCGTGAGAGTGACATACATAAGAA    650

BSNT_01159       651 AAAAGGCGACATTGAAAAGCGGACTGAGGCTTACTTGAAGATTAAGACAG    700
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU06812___ye    651 AAAAGGCGACATTGAAAAGCGGACTGAGGCTTACTTGAAGATTAAGAAAG    700

BSNT_01159       701 AGGAAGCGAAGAAACGCGAGATTGAAAAACTGAAAGAAAGACTGAAAAAC    750
                     |||||||||||.|||||||||||||.||||||||||||||||||||||||
BSU06812___ye    701 AGGAAGCGAAGGAACGCGAGATTGAGAAACTGAAAGAAAGACTGAAAAAC    750

BSNT_01159       751 TACGATTATGCGGATGCCGATGAATTTTACTCAATGGCAAAAACGATCGG    800
                     |||||||||||.||||||||||||||.|||..||||||||||||||||||
BSU06812___ye    751 TACGATTATGCAGATGCCGATGAATTCTACGAAATGGCAAAAACGATCGG    800

BSNT_01159       801 CTATGAAAATCTAACAGCAGAACAACAGAGATACTTCACCCAAATCGAAA    850
                     ||||||||||||.|||||.||||||||||||||||||||||||||.||||
BSU06812___ye    801 CTATGAAAATCTGACAGCTGAACAACAGAGATACTTCACCCAAATTGAAA    850

BSNT_01159       851 ACACGCGTGAACTTGAAGCAGGCTTCAAAGGGGTTGCCGTCGGCCTTTAT    900
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU06812___ye    851 ACACGCGTGAGCTTGAAGCAGGCTTCAAAGGGGTTGCCGTCGGCCTTTAT    900

BSNT_01159       901 GATTCCGGGAAAGACGCGGTCGTAGGCCTGTGGGATATGGTCACAGATCC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye    901 GATTCCGGGAAAGACGCGGTCGTAGGCCTGTGGGATATGGTCACAGATCC    950

BSNT_01159       951 GGGCGGAACCGTTGAAGCCATTACAGGAGCGATGGCTCACCCGATCAAAA   1000
                     |||.||||||||||||||.|||||.|||||||||||||||||||||||||
BSU06812___ye    951 GGGAGGAACCGTTGAAGCGATTACCGGAGCGATGGCTCACCCGATCAAAA   1000

BSNT_01159      1001 CGTATGAAGCCATTTCAGCGGCAATCGAAGAATCATACCAAAAAGACATG   1050
                     ||||||||||||||||||||||||||||||||||.||.||||||||||||
BSU06812___ye   1001 CGTATGAAGCCATTTCAGCGGCAATCGAAGAATCGTATCAAAAAGACATG   1050

BSNT_01159      1051 GTGAATGGCGACACCTACTCAAGAGCAAGATGGGTGTCATATGCGGTTGG   1100
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU06812___ye   1051 GTGAATGGTGACACCTACTCAAGAGCAAGATGGGTGTCATATGCGGTTGG   1100

BSNT_01159      1101 CACTGTTGTCACATCAATTGTCGGCACAAAAGGTGTAGGAGCCGTCTCTA   1150
                     |||||||||||||||||||||||||||||||||.||||||||||||||.|
BSU06812___ye   1101 CACTGTTGTCACATCAATTGTCGGCACAAAAGGCGTAGGAGCCGTCTCAA   1150

BSNT_01159      1151 AAACAGGCACAGCTGCCAAAGTGACGGCCAAAGTCAAAACAGCAGCAAAC   1200
                     ||||.||||||||.||||||||||||.|||||||||||||||||||||.|
BSU06812___ye   1151 AAACTGGCACAGCCGCCAAAGTGACGACCAAAGTCAAAACAGCAGCAAGC   1200

BSNT_01159      1201 AAATCAGCAACAGCCCAAAAAGCCATAATGGTCTCAAAACAAACCGTTGA   1250
                     ||||||||||||||||||||||||||||..||||||||||||||||||||
BSU06812___ye   1201 AAATCAGCAACAGCCCAAAAAGCCATAACAGTCTCAAAACAAACCGTTGA   1250

BSNT_01159      1251 TCACATCAAACAAAAAGTAAACACAGGCATTGAAGTATCAAAAAAACACG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye   1251 TCACATCAAACAAAAAGTAAACACAGGCATTGAAGTATCAAAAAAACACG   1300

BSNT_01159      1301 TCAAAACCAGGTTAAATCAAATCGGAGATCTCACTCTAGCTGATATTCTC   1350
                     |||||||||.||||||||||||||||||||||||.||.||.|||||||||
BSU06812___ye   1301 TCAAAACCAAGTTAAATCAAATCGGAGATCTCACACTTGCGGATATTCTC   1350

BSNT_01159      1351 CCGTATCATCCGCGTCACGACTTAGTGCCGGCGGGCGTTCCTTACAACGC   1400
                     |||||||||||.|||||.||.|||||||||||.|||||||||||||||||
BSU06812___ye   1351 CCGTATCATCCCCGTCATGATTTAGTGCCGGCAGGCGTTCCTTACAACGC   1400

BSNT_01159      1401 GGTCAACGGGGTCACACTTAAAGAGGGACTGCAAAAATTCGCCAAGGTCA   1450
                     .||||||||||||||.||||||||.|||||||||||||||||||||||||
BSU06812___ye   1401 AGTCAACGGGGTCACGCTTAAAGAAGGACTGCAAAAATTCGCCAAGGTCA   1450

BSNT_01159      1451 TTCTTCCGAAACCATACGGAACGTCATCAAGCGGAAGACGAACTCCAGCG   1500
                     |.||.|||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye   1451 TCCTGCCGAAACCATACGGAACGTCATCAAGCGGAAGACGAACTCCAGCG   1500

BSNT_01159      1501 CCACATGTACCGCCGGTAACCGTCAAATACGGCGAGCATTTCGCAAGATG   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye   1501 CCACATGTACCGCCGGTAACCGTCAAATACGGCGAGCATTTCGCAAGATG   1550

BSNT_01159      1551 GAGCAGAAAGAAAGTACTGAAGCCGAATGTTATCTACAAAACAAAAGAAG   1600
                     |||||||||||||||.||||||||.|||.|.|||||||||||||||||||
BSU06812___ye   1551 GAGCAGAAAGAAAGTGCTGAAGCCTAATATCATCTACAAAACAAAAGAAG   1600

BSNT_01159      1601 GCTACACATACACGACTGACAACTATGGTAGAATTACAAGTGTCAAAGCA   1650
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU06812___ye   1601 GCTACACGTACACGACTGACAACTATGGTAGAATTACAAGTGTCAAAGCA   1650

BSNT_01159      1651 GACTTGCAGCTGGGAGAAGCAAAACGAAACCAATATGCACAGACGAATGC   1700
                     ||||||||||||||||||||.||||||||||||||||||||.||||||||
BSU06812___ye   1651 GACTTGCAGCTGGGAGAAGCGAAACGAAACCAATATGCACAAACGAATGC   1700

BSNT_01159      1701 TGGAAAGCCCCAAGACCGAAAGCCCGACGATGACGGCGGCCATTTAATCG   1750
                     ||||||||||||.|||||||||||.|||||||||||||||||||||||||
BSU06812___ye   1701 TGGAAAGCCCCAGGACCGAAAGCCTGACGATGACGGCGGCCATTTAATCG   1750

BSNT_01159      1751 CCACCCAATTCAAAGGCTCAGGCCAGTTCGACAATATCGTGCCGATGAAT   1800
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU06812___ye   1751 CCACCCAATTCAAAGGCTCAGGCCAGTTTGACAATATCGTGCCGATGAAT   1800

BSNT_01159      1801 TCTCAGATTAATAGGAGTGGCGGGAAATGGTACAACATGGAGCAAGTGTG   1850
                     |||||||||||||||||.||.|||||||||||..|.||||||||.|.|||
BSU06812___ye   1801 TCTCAGATTAATAGGAGCGGTGGGAAATGGTATGAGATGGAGCAGGAGTG   1850

BSNT_01159      1851 GTCTAAAGCTTTAAGTCAAAAACCACCGAAACAGGTGACAGTTAAAATTA   1900
                     |.|.|||||..||||..||||||||||.|||.|.||..|||||.||||  
BSU06812___ye   1851 GGCAAAAGCCCTAAGCAAAAAACCACCTAAAAAAGTAGCAGTTCAAAT--   1898

BSNT_01159      1901 ACAAC--ATTTATGAGGGTGATTCTTTAAGACCTTCTAAATTTATTGTTG   1948
                     |.|||  .|.|||...||.|||||..|.|||||.||   ||.|.|.|.||
BSU06812___ye   1899 AGAACCAGTCTATTCTGGGGATTCACTTAGACCATC---ATATTTCGATG   1945

BSNT_01159      1949 TA---TATAAAGTTGGG----GATAAAGAACCTGTTAGAACAATC---AT   1988
                     ||   ||.|||.|||||    || ||||||      |.||...||   ||
BSU06812___ye   1946 TAACCTACAAAATTGGGAGCAGA-AAAGAA------ATAAGCGTCTCTAT   1988

BSNT_01159      1989 TAAGAATAAAGCTGGGGGTTAA   2010
                     |||.|||.|..||||||||||.
BSU06812___ye   1989 TAAAAATCAGCCTGGGGGTTAG   2010


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