Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01171 and BSU06890

See Amino acid alignment / Visit BSNT_01171 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:49
# Commandline: needle
#    -asequence dna-align/BSNT_01171___cotJA.1.22522.seq
#    -bsequence dna-align/BSU06890___cotJA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01171___cotJA-BSU06890___cotJA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01171___cotJA-BSU06890___cotJA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01171___cotJA
# 2: BSU06890___cotJA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     248/249 (99.6%)
# Similarity:   248/249 (99.6%)
# Gaps:           0/249 ( 0.0%)
# Score: 1236.0
# 
#
#=======================================

BSNT_01171___      1 ATGAAGGATATGCAGCCGTTTTCGCCTGTCAAATCATATACGCCCTTTCA     50
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU06890___co      1 ATGAAGGATATGCAGCCGTTTACGCCTGTCAAATCATATACGCCCTTTCA     50

BSNT_01171___     51 CAGCCGTTTTGATCCCTGTCCGCCCATAGGGAAGAAATATTACAGAACGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06890___co     51 CAGCCGTTTTGATCCCTGTCCGCCCATAGGGAAGAAATATTACAGAACGC    100

BSNT_01171___    101 CCCCTAACCTTTATATGACCTTTCAGCCTGAGCACATGGAGCAGTTTTCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06890___co    101 CCCCTAACCTTTATATGACCTTTCAGCCTGAGCACATGGAGCAGTTTTCG    150

BSNT_01171___    151 CCGATGGAGGCTTTGAGGAAAGGCACCCTTTGGAAGGATCTCTATGATTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06890___co    151 CCGATGGAGGCTTTGAGGAAAGGCACCCTTTGGAAGGATCTCTATGATTT    200

BSNT_01171___    201 TTATGAAAACCCTTATCGAGGGGGAGACGCACATGGCAAAAAAGGTTGA    249
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU06890___co    201 TTATGAAAACCCTTATCGAGGGGGAGACGCACATGGCAAAAAAGGTTGA    249


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.