Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01241 and BSU07260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:57
# Commandline: needle
# -asequence dna-align/BSNT_01241___yfnI.1.22522.seq
# -bsequence dna-align/BSU07260___ltaSA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01241___yfnI-BSU07260___ltaSA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01241___yfnI-BSU07260___ltaSA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01241___yfnI
# 2: BSU07260___ltaSA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1962
# Identity: 1895/1962 (96.6%)
# Similarity: 1895/1962 (96.6%)
# Gaps: 42/1962 ( 2.1%)
# Score: 9375.0
#
#
#=======================================
BSNT_01241___ 1 ATGAATGAAGAACTTAAAGTGTTTAAGAAAGTAGAGGTTGCCATGAAGAA 50
||||||||
BSU07260___lt 1 ------------------------------------------ATGAAGAA 8
BSNT_01241___ 51 ACTTTTTTCTTACAAACTTAGCTTTTTTGTGCTGGCTGTTATACTGTTTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 9 ACTTTTTTCTTACAAACTTAGCTTTTTTGTGCTGGCTGTTATACTGTTTT 58
BSNT_01241___ 101 GGGCAAAAACGTATTTATCCTACAAGACTGAGTTTAATCTTGGGGTAAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 59 GGGCAAAAACGTATTTATCCTACAAGACTGAGTTTAATCTTGGGGTAAAA 108
BSNT_01241___ 151 GGCACAACTCAGGAGATCCTCCTGATATTTAACCCATTCTCAAGCGCCGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 109 GGCACAACTCAGGAGATCCTCCTGATATTTAACCCATTCTCAAGCGCCGT 158
BSNT_01241___ 201 CTTCTTTTTAGGACTGGCTTTGCTGGCGAAAGGGCGTAAATCAGCCATTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 159 CTTCTTTTTAGGACTGGCTTTGCTGGCGAAAGGGCGTAAATCAGCCATTA 208
BSNT_01241___ 251 TTATGCTGATTATCGATTTCTTGATGACATTTGTGTTATATGCAAATATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 209 TTATGCTGATTATCGATTTCTTGATGACATTTGTGTTATATGCAAATATT 258
BSNT_01241___ 301 TTATTCTATCGTTTCTTTGACGATTTCTTGACGTTCCCGAACATTAAACA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 259 TTATTCTATCGTTTCTTTGACGATTTCTTGACGTTCCCGAACATTAAACA 308
BSNT_01241___ 351 GTCCGGAAACGTTGGAAACATGGGAGACGGGATTTTCAGTATCATGGCCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 309 GTCCGGAAACGTTGGAAACATGGGAGACGGGATTTTCAGTATCATGGCCG 358
BSNT_01241___ 401 GTCATGATATTTTCTATTTCTTAGATATTATCATTTTGATTGCGGTATTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 359 GTCATGATATTTTCTATTTCTTAGATATTATCATTTTGATTGCGGTATTG 408
BSNT_01241___ 451 ATCTGGAGACCTGAATTAAAAGAATACAAAATGAAAAAACGCTTTGCGTC 500
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU07260___lt 409 ATCTGGAGACCTGAATTAAAAGAATACAAAATGAAAAAACGCTTTGCATC 458
BSNT_01241___ 501 TTTAGTGATCCTTTCTGGGATCGCACTGTTTTTCATCAACCTGCACTATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 459 TTTAGTGATCCTTTCTGGGATCGCACTGTTTTTCATCAACCTGCACTATG 508
BSNT_01241___ 551 CGGAAAAAGACCGTCCGCAGCTGCTGACAAGAACGTTTGACCGCAATTAT 600
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU07260___lt 509 CGGAAAAAGACCGTCCGCAACTGCTGACAAGAACGTTTGACCGCAATTAT 558
BSNT_01241___ 601 ATCGTGAAGTATTTAGGTCTGTACAACTACACCATTTATGACGGTGTGCA 650
||.|||||.|||||||||.|.||||||||||||||||||||||||||.||
BSU07260___lt 559 ATTGTGAAATATTTAGGTTTATACAACTACACCATTTATGACGGTGTACA 608
BSNT_01241___ 651 GACGGCTCAAACAGAAACGCAACGGGCCTATGCAAGCAGCGATGATTTAA 700
|||||||||||||||.||||||.|.|||||||||||||||||||||||||
BSU07260___lt 609 GACGGCTCAAACAGAGACGCAAAGAGCCTATGCAAGCAGCGATGATTTAA 658
BSNT_01241___ 701 CAAGCGTCGAGAATTACACGACGTCTCATTATGCGAAACCAAACGCCGAG 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 659 CAAGTGTCGAGAATTACACGACGTCTCATTATGCGAAACCAAACGCCGAG 708
BSNT_01241___ 751 TACTTCGGCTCTGCCAAAGGCAAAAATATCATTAAAATTCACCTCGAAAG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 709 TACTTCGGCTCTGCCAAAGGCAAAAATATCATTAAAATTCACCTCGAAAG 758
BSNT_01241___ 801 CTTCCAGTCATTCCTGATTGACTACAAGCTAAACGGTGAAGAGGTGACGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 759 CTTCCAGTCATTCCTGATTGACTACAAGCTAAACGGTGAAGAGGTGACGC 808
BSNT_01241___ 851 CTTTCTTAAATAAACTTGCGCACGGCGGGGAAGATGTGACGTATTTTGAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 809 CTTTCTTAAATAAACTTGCGCACGGCGGGGAAGATGTGACGTATTTTGAT 858
BSNT_01241___ 901 AACTTCTTCCATCAGACAGGCCAGGGAAAAACATCTGATGCCGAGCTGAC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 859 AACTTCTTCCATCAGACAGGCCAGGGAAAAACATCTGATGCCGAGCTGAC 908
BSNT_01241___ 951 AATGGATAACTCGATCTTCGGTCTTCCTGAAGGCTCCGCGTTTGTGACGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 909 AATGGATAACTCGATCTTCGGTCTTCCTGAAGGCTCCGCGTTTGTGACGA 958
BSNT_01241___ 1001 AAGGCGAAAACACTTACCAATCGCTTCCTGCGATTTTAGACCAGAAGGAA 1050
|||||||||||||.|||||.||||||||||||||||||||||||||||||
BSU07260___lt 959 AAGGCGAAAACACCTACCAGTCGCTTCCTGCGATTTTAGACCAGAAGGAA 1008
BSNT_01241___ 1051 GGCTATACAAGCGCCGTCCTGCATGGTGATTACAAATCGTTCTGGAACCG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1009 GGCTATACAAGCGCCGTCCTGCATGGTGATTACAAATCGTTCTGGAACCG 1058
BSNT_01241___ 1101 TGACCAGATTTACAAACATATCGGATACGACAAGTTCTTTGACGCAAGTA 1150
|||||||||||||||||||||||||||.|||||||||||.||||||||.|
BSU07260___lt 1059 TGACCAGATTTACAAACATATCGGATATGACAAGTTCTTCGACGCAAGCA 1108
BSNT_01241___ 1151 CGTACGATATGTCGGATGAAAATGTGATTAACATGGGGCTTAAGGATAAG 1200
||||.||||||||.|||||||||||||||||.||||||||||||||||||
BSU07260___lt 1109 CGTATGATATGTCAGATGAAAATGTGATTAATATGGGGCTTAAGGATAAG 1158
BSNT_01241___ 1201 CCGTTCTTTACAGAATCGATTTCAAAGCTTGAATCTCTTAAACAGCCGTT 1250
|||||||||||||||||||||.|||||||||||||||||||||||||.||
BSU07260___lt 1159 CCGTTCTTTACAGAATCGATTCCAAAGCTTGAATCTCTTAAACAGCCATT 1208
BSNT_01241___ 1251 TTATGCGCATTTGATTACATTGACAAACCATTATCCGTTTAACCTTGATG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1209 TTATGCGCATTTGATTACATTGACAAACCATTATCCGTTTAACCTTGATG 1258
BSNT_01241___ 1301 AAAAAGACGCGTCTCTTAAAAAAGCGACAACAGGCGATAACACAGTTGAC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1259 AAAAAGACGCGTCTCTTAAAAAAGCGACAACAGGCGATAACACAGTTGAC 1308
BSNT_01241___ 1351 AGCTACTTCCAGACAGCGCGTTACCTTGACGAAGCGCTTGAGCAATTCTT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1309 AGCTACTTCCAGACAGCGCGTTACCTTGACGAAGCGCTTGAGCAATTCTT 1358
BSNT_01241___ 1401 CAAGGAGCTGAAGGAAGCCGGCCTGTATGACAACTCAGTCATCATGATTT 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1359 CAAGGAGCTGAAGGAAGCCGGCCTGTATGACAACTCAGTCATCATGATTT 1408
BSNT_01241___ 1451 ACGGTGACCATAACGGTATTTCTGAAAACCATAACCGAGCGATGAAAGAG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1409 ACGGTGACCATAACGGTATTTCTGAAAACCATAACCGAGCGATGAAAGAG 1458
BSNT_01241___ 1501 ATTCTTGGAAAAGAGATCACAGATTATCAAAACGCACAGAACCAGCGTGT 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1459 ATTCTTGGAAAAGAGATCACAGATTATCAAAACGCACAGAACCAGCGTGT 1508
BSNT_01241___ 1551 GCCGCTGATGATCCGCGTTCCTGGCAAAAAAGGCGGAGTGAACCATACGT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1509 GCCGCTGATGATCCGCGTTCCTGGCAAAAAAGGCGGAGTGAACCATACGT 1558
BSNT_01241___ 1601 ATGGCGGCGAAATTGACGTTATGCCGACACTTCTGCACTTAGAAGGAATT 1650
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU07260___lt 1559 ATGGCGGCGAAATTGACGTCATGCCGACACTTCTGCACTTAGAAGGAATT 1608
BSNT_01241___ 1651 GATTCTCAGAAATACATCAACTTTGGTACTGATTTATTCTCTAAAGACCA 1700
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU07260___lt 1609 GATTCTCAGAAATATATCAACTTTGGTACTGATTTATTCTCTAAAGACCA 1658
BSNT_01241___ 1701 CGACGATACAGTGGCATTCAGAAACGGAGACTTCGTAACGCCGAAGTACA 1750
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1659 CGACGATACGGTGGCATTCAGAAACGGAGACTTCGTAACGCCGAAGTACA 1708
BSNT_01241___ 1751 CATCAGTCGACAATATCATTTACGATACGAAGACAGGTGAAAAACTGAAA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1709 CATCAGTCGACAATATCATTTACGATACGAAGACAGGTGAAAAACTGAAA 1758
BSNT_01241___ 1801 GCGAATGAAGAAACGAAGAATCTGAAAACAAGAGTGAACCAGCAGCTGAG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1759 GCGAATGAAGAAACGAAGAATCTGAAAACAAGAGTGAACCAGCAGCTGAG 1808
BSNT_01241___ 1851 CCTTTCAGACAGTGTCCTGTACAAAGACTTGCTGAGGTTCCATAAACTAA 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07260___lt 1809 CCTTTCAGACAGTGTCCTGTACAAAGACTTGCTGAGGTTCCATAAACTAA 1858
BSNT_01241___ 1901 ATGATTTCAAAGCCGTTGATCCGTCAGACTATCATTACGGCAAGGAAAAA 1950
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU07260___lt 1859 ATGATTTCAAAGCCGTTGATCCGTCAGACTATCATTACGGCAAGGAGAAA 1908
BSNT_01241___ 1951 GAAATCAAATAA 1962
||||||||||||
BSU07260___lt 1909 GAAATCAAATAA 1920
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