Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01246 and BSU07300

See Amino acid alignment / Visit BSNT_01246 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:58
# Commandline: needle
#    -asequence dna-align/BSNT_01246___yfnE.1.22522.seq
#    -bsequence dna-align/BSU07300___yfnE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01246___yfnE-BSU07300___yfnE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01246___yfnE-BSU07300___yfnE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01246___yfnE
# 2: BSU07300___yfnE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity:    1179/1179 (100.0%)
# Similarity:  1179/1179 (100.0%)
# Gaps:           0/1179 ( 0.0%)
# Score: 5895.0
# 
#
#=======================================

BSNT_01246___      1 GTGAAAGCAAGCGTTATTATTCCTGCATATAATTCGAAGGAGCGTCTTTA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf      1 GTGAAAGCAAGCGTTATTATTCCTGCATATAATTCGAAGGAGCGTCTTTA     50

BSNT_01246___     51 CAACAGCCTTCTGTCATTAAACCAGCAGGAGTGCGATGAAGAATTTGAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf     51 CAACAGCCTTCTGTCATTAAACCAGCAGGAGTGCGATGAAGAATTTGAAG    100

BSNT_01246___    101 TCATTGTAGCGGACAATGGCTCTGAGGACGGGACGCTCTCGATGCTTGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    101 TCATTGTAGCGGACAATGGCTCTGAGGACGGGACGCTCTCGATGCTTGAG    150

BSNT_01246___    151 TCATTTCAAGCTGATTTTCCGCTGATCTTTACACGGATTAAAGAAAACAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    151 TCATTTCAAGCTGATTTTCCGCTGATCTTTACACGGATTAAAGAAAACAG    200

BSNT_01246___    201 GGGCATTGCGTACGGACGAAATCAGGCGCTTCGCAATGCCAGAGGAGACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    201 GGGCATTGCGTACGGACGAAATCAGGCGCTTCGCAATGCCAGAGGAGACA    250

BSNT_01246___    251 TCCTGATTTTCCATGACAGCGATATGCTTGCGGCAAAGGACCTTGTGGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    251 TCCTGATTTTCCATGACAGCGATATGCTTGCGGCAAAGGACCTTGTGGCA    300

BSNT_01246___    301 AAACATATTAAAGCCCATGAGAACGAAGAGAATCTCGTCGTGTGCGGGTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    301 AAACATATTAAAGCCCATGAGAACGAAGAGAATCTCGTCGTGTGCGGGTT    350

BSNT_01246___    351 GTTTTGGAAACGGATCTACAGTTTTTACTATGAACGATTTGAAGAAGAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    351 GTTTTGGAAACGGATCTACAGTTTTTACTATGAACGATTTGAAGAAGAAC    400

BSNT_01246___    401 ATAAGGAACAGCTCGCAAAGCTCACAGGTGAAATGCCGAAGAAAGACAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    401 ATAAGGAACAGCTCGCAAAGCTCACAGGTGAAATGCCGAAGAAAGACAAA    450

BSNT_01246___    451 CAAAAGCTGCTGGAGGAAGCGGACATCAAAAACGGAAGCTTTCTTGATAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    451 CAAAAGCTGCTGGAGGAAGCGGACATCAAAAACGGAAGCTTTCTTGATAA    500

BSNT_01246___    501 AAGCTTTGACCTCGATACCGACTTTATAGACGTGCTCAAGAAGATTTTAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    501 AAGCTTTGACCTCGATACCGACTTTATAGACGTGCTCAAGAAGATTTTAG    550

BSNT_01246___    551 ATGAGTACGGCGATGACTTGAAAGGCTATCATATGCCATGGCGCTTTTTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    551 ATGAGTACGGCGATGACTTGAAAGGCTATCATATGCCATGGCGCTTTTTT    600

BSNT_01246___    601 ATCACGAATAATTCCTCTGTGAAACGCAAGCATGTGGTTGACCTCGGTTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    601 ATCACGAATAATTCCTCTGTGAAACGCAAGCATGTGGTTGACCTCGGTTT    650

BSNT_01246___    651 ATTTGACGAAGGCATTGTGCGGTACGGGTTTGAGGATTATGACCTCGGGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    651 ATTTGACGAAGGCATTGTGCGGTACGGGTTTGAGGATTATGACCTCGGGA    700

BSNT_01246___    701 TCAGGCTTCATCAGGCCGGATTGACCTTCAGGCTTCGCCGTGATATTGTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    701 TCAGGCTTCATCAGGCCGGATTGACCTTCAGGCTTCGCCGTGATATTGTC    750

BSNT_01246___    751 AGTGTTCATCAGGAACATCCAAGCAATTGTAAGTCTGTAGACGATATTCG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    751 AGTGTTCATCAGGAACATCCAAGCAATTGTAAGTCTGTAGACGATATTCG    800

BSNT_01246___    801 GGCAAACATTGCCTATATGTGCGATAAATACAATAACATCCGCTCCTTAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    801 GGCAAACATTGCCTATATGTGCGATAAATACAATAACATCCGCTCCTTAG    850

BSNT_01246___    851 ACGTTCATCTCGCTTTTAATGGGCCGTTCCCGCCTGACATGACGAACAGA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    851 ACGTTCATCTCGCTTTTAATGGGCCGTTCCCGCCTGACATGACGAACAGA    900

BSNT_01246___    901 ATCATGGCTGATATTCAAAAGCTGCTGGAATCACAGAAATATGATATGCT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    901 ATCATGGCTGATATTCAAAAGCTGCTGGAATCACAGAAATATGATATGCT    950

BSNT_01246___    951 GCTGAATCTGTTTCTTGAGCTTCTGCATGTTGTTAAAGAGCGCAACATTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf    951 GCTGAATCTGTTTCTTGAGCTTCTGCATGTTGTTAAAGAGCGCAACATTG   1000

BSNT_01246___   1001 ATCCGGATTGGCGAAAGAAATCCCCAAGGGTGACGGCGAAAAGCTTTGAT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf   1001 ATCCGGATTGGCGAAAGAAATCCCCAAGGGTGACGGCGAAAAGCTTTGAT   1050

BSNT_01246___   1051 TTGCAAACTGTCCGCAAGCTTCTGCCTAAGGCGAAGAAAAAGCTAGGCGT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf   1051 TTGCAAACTGTCCGCAAGCTTCTGCCTAAGGCGAAGAAAAAGCTAGGCGT   1100

BSNT_01246___   1101 GAACGATTTTGCCAACGCACTGTATGCGCTTGTCAACGATTTGCTGCACG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07300___yf   1101 GAACGATTTTGCCAACGCACTGTATGCGCTTGTCAACGATTTGCTGCACG   1150

BSNT_01246___   1151 TGGATCTTAGATCATTGGATGTGGTATAA   1179
                     |||||||||||||||||||||||||||||
BSU07300___yf   1151 TGGATCTTAGATCATTGGATGTGGTATAA   1179


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