Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01332 and BSU07980

See Amino acid alignment / Visit BSNT_01332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:10
# Commandline: needle
#    -asequence dna-align/BSNT_01332___yfjS.1.22522.seq
#    -bsequence dna-align/BSU07980___pdaA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01332___yfjS-BSU07980___pdaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01332___yfjS-BSU07980___pdaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01332___yfjS
# 2: BSU07980___pdaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity:     777/792 (98.1%)
# Similarity:   777/792 (98.1%)
# Gaps:           0/792 ( 0.0%)
# Score: 3825.0
# 
#
#=======================================

BSNT_01332___      1 ATGAAGTGGATGTGTTCAATATGCTGCGCCGCCGTATTGCTTGCCGGAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd      1 ATGAAGTGGATGTGTTCAATATGCTGCGCCGCCGTATTGCTTGCCGGAGG     50

BSNT_01332___     51 TGCAGCACAGGCGGAAGCGGTGCCGAATGAGCCGATTAATTGGGGCTTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd     51 TGCAGCACAGGCGGAAGCGGTGCCGAATGAGCCGATTAATTGGGGCTTTA    100

BSNT_01332___    101 AACGAAGTGTCAATCATCAGCCGCCAGATGCCGGGAAGCAGCTGAACAGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    101 AACGAAGTGTCAATCATCAGCCGCCAGATGCCGGGAAGCAGCTGAACAGT    150

BSNT_01332___    151 TTAATTGAAAAATATGACGCGTTTTATTTAGGGAATACAAAGGAAAAAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    151 TTAATTGAAAAATATGACGCGTTTTATTTAGGGAATACAAAGGAAAAAAC    200

BSNT_01332___    201 GATTTACTTAACGTTTGATAACGGATATGAAAATGGCTATACGCCAAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    201 GATTTACTTAACGTTTGATAACGGATATGAAAATGGCTATACGCCAAAAG    250

BSNT_01332___    251 TGCTTGATGTCTTAAAAAAACATCGCGTAACAGGAACGTTTTTTGTCACC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    251 TGCTTGATGTCTTAAAAAAACATCGCGTAACAGGAACGTTTTTTGTCACC    300

BSNT_01332___    301 GGGCATTTCGTAAAGGACCAGCCTCAGCTGATCAAACGAATGTCAGATGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    301 GGGCATTTCGTAAAGGACCAGCCTCAGCTGATCAAACGAATGTCAGATGA    350

BSNT_01332___    351 GGGCCATATTATCGGCAACCATTCCTTTCACCATCCGGATTTAACGACAA    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU07980___pd    351 GGGCCATATTATCGGCAATCATTCCTTTCACCATCCGGATTTAACGACAA    400

BSNT_01332___    401 AAACAGCTGATCAGATTCAGGATGAACTAGATTCAGTCAACGAAGAGGTT    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU07980___pd    401 AAACAGCTGATCAGATTCAGGATGAACTTGATTCAGTCAACGAAGAGGTT    450

BSNT_01332___    451 TATAAAATTACGGGAAAGCAGGACAATCTGTACTTGCGTCCGCCGCGTGG    500
                     ||||||||||||||||||||||||||.|||||.||||||||||||||.||
BSU07980___pd    451 TATAAAATTACGGGAAAGCAGGACAACCTGTATTTGCGTCCGCCGCGCGG    500

BSNT_01332___    501 CGTGTTCAGTGAGTACGTACTGAAAGAAACGAAACGCCTCGGCTATCAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    501 CGTGTTCAGTGAGTACGTACTGAAAGAAACGAAACGCCTCGGCTATCAAA    550

BSNT_01332___    551 CCGTTTTCTGGTCGGTCGCTTTTGTTGATTGGAAAATCAACAACCAAAAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    551 CCGTTTTCTGGTCGGTCGCTTTTGTTGATTGGAAAATCAACAACCAAAAG    600

BSNT_01332___    601 GGGAAGAAATATGCCTACGATCATATGATTAAGCAGGCGCACCCGGGAGC    650
                     ||.||||||||||||||||||||||||||.||||||||||||||||||||
BSU07980___pd    601 GGAAAGAAATATGCCTACGATCATATGATCAAGCAGGCGCACCCGGGAGC    650

BSNT_01332___    651 CATTTACCTGCTGCACACCGTATCAAGGGACAATGCTGAAGCACTGGATG    700
                     ||||||||||||.|||||||||||.|||||||||||.|||||.|||||||
BSU07980___pd    651 CATTTACCTGCTTCACACCGTATCGAGGGACAATGCAGAAGCGCTGGATG    700

BSNT_01332___    701 ATGCGATTACAGATCTGAAAAAACAGGGCTACACTTTTAAAAGCATTGAT    750
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU07980___pd    701 ACGCGATTACAGATCTGAAAAAACAGGGCTACACTTTTAAAAGCATTGAT    750

BSNT_01332___    751 GATCTGATGTTTGAGAAAGAAATGAAGATGCCGTCCTTGTAA    792
                     |||||||||||||||||||||||||.|.|||||||.||||||
BSU07980___pd    751 GATCTGATGTTTGAGAAAGAAATGAGGCTGCCGTCTTTGTAA    792


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.