Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01352 and BSU08110

See Amino acid alignment / Visit BSNT_01352 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:12
# Commandline: needle
#    -asequence dna-align/BSNT_01352___sspH.1.22522.seq
#    -bsequence dna-align/BSU08110___sspH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01352___sspH-BSU08110___sspH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01352___sspH-BSU08110___sspH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01352___sspH
# 2: BSU08110___sspH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:     176/180 (97.8%)
# Similarity:   176/180 (97.8%)
# Gaps:           0/180 ( 0.0%)
# Score: 864.0
# 
#
#=======================================

BSNT_01352___      1 ATGAATATTCAAAGGGCGAAAGAAATTGTAGAATCTCCCGATATGAAAAA     50
                     |||||||||||||||||||||||||||||||||||||||||.|||||.||
BSU08110___ss      1 ATGAATATTCAAAGGGCGAAAGAAATTGTAGAATCTCCCGACATGAAGAA     50

BSNT_01352___     51 AGTAACATACAACGGCGTTCCTATTTACATTCAGCACGTAAATGAAGAAA    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU08110___ss     51 AGTAACATATAACGGCGTTCCTATTTACATTCAGCACGTAAATGAAGAAA    100

BSNT_01352___    101 CTGGAACAGCAAGAATTAATCCGCTTGACGAACCGCAAGAGGAGCATGAA    150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU08110___ss    101 CTGGAACAGCAAGAATTTATCCGCTTGACGAACCGCAAGAGGAGCATGAA    150

BSNT_01352___    151 GTGCAGCTGAACAGCTTAAAAGAGGATTAA    180
                     ||||||||||||||||||||||||||||||
BSU08110___ss    151 GTGCAGCTGAACAGCTTAAAAGAGGATTAA    180


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